RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 RPS3P23396 243 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL11A1-204ENST00000427239 NBL1P41271 181 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 NXPH1P58417 271 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 B4GALNT1Q00973 533 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 UAP1Q16222 522 aaPredicted RBP15.23■□□□□ 0.03
COL11A1-204ENST00000427239 KHDC1Q4VXA5 237 aaKnown RBP15.23■□□□□ 0.03
COL11A1-204ENST00000427239 BEND6Q5SZJ8 279 aaPredicted RBP15.23■□□□□ 0.03
COL11A1-204ENST00000427239 UBAP2Q5T6F2 1119 aaKnown RBP15.23■□□□□ 0.03
COL11A1-204ENST00000427239 ENPP7Q6UWV6 458 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 MICALCLQ6ZW33 695 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 MARK2Q7KZI7 788 aaKnown RBP15.23■□□□□ 0.03
COL11A1-204ENST00000427239 STRA8Q7Z7C7 330 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 CNPY4Q8N129 248 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 PPM1NQ8N819 430 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 SUMF1Q8NBK3 374 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 LPGAT1Q92604 370 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 BOCQ9BWV1 1114 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 ERVMER34-1Q9H9K5 563 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 SMYD2Q9NRG4 433 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 FETUBQ9UGM5 382 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 PRDM4Q9UKN5 801 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 CORO1CQ9ULV4 474 aaPredicted RBP15.23■□□□□ 0.03
COL11A1-204ENST00000427239 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 COMMD10Q9Y6G5 202 aa15.23■□□□□ 0.03
COL11A1-204ENST00000427239 OR1I1O60431 355 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 ESR1P03372 595 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 IVLP07476 585 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 RETP07949 1114 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 OR56A5P0C7T3 313 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 POLD2P49005 469 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 BLKP51451 505 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 SRP54P61011 504 aaKnown RBP15.22■□□□□ 0.03
COL11A1-204ENST00000427239 FZD2Q14332 565 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 SLC23A3Q6PIS1 610 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 PARGQ86W56 976 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 CLDN19Q8N6F1 224 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 PNPLA1Q8N8W4 532 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 RASGEF1AQ8N9B8 481 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 UHMK1Q8TAS1 419 aaKnown RBP15.22■□□□□ 0.03
COL11A1-204ENST00000427239 SGF29Q96ES7 293 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 P2RY12Q9H244 342 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 PPCSQ9HAB8 311 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 FBXO6Q9NRD1 293 aaPredicted RBP15.22■□□□□ 0.03
COL11A1-204ENST00000427239 KLQ9UEF7 1012 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 SLC6A14Q9UN76 642 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 CRYL1Q9Y2S2 319 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 HCN4Q9Y3Q4 1203 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 DNMT3AQ9Y6K1 912 aaPredicted RBP15.22■□□□□ 0.03
COL11A1-204ENST00000427239 IKBKGQ9Y6K9 419 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 DGKBQ9Y6T7 804 aa15.22■□□□□ 0.03
COL11A1-204ENST00000427239 EXOC1LA0A1B0GW35 172 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 UBA6A0AVT1 1052 aaPredicted RBP15.21■□□□□ 0.03
COL11A1-204ENST00000427239 PRSS38A1L453 326 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 KLHL33A6NCF5 533 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 H3BMM5 538 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 PIAS1O75925 651 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 NUDT17P0C025 328 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 H2AFXP16104 143 aaPredicted RBP15.21■□□□□ 0.03
COL11A1-204ENST00000427239 ZNF8P17098 575 aaPredicted RBP15.21■□□□□ 0.03
COL11A1-204ENST00000427239 GABRB3P28472 473 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 GP5P40197 560 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 CD151P48509 253 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 CSE1LP55060 971 aaKnown RBP15.21■□□□□ 0.03
COL11A1-204ENST00000427239 PPARDQ03181 441 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 TPRG1LQ5T0D9 272 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 ZNF648Q5T619 568 aaPredicted RBP15.21■□□□□ 0.03
COL11A1-204ENST00000427239 GRTP1Q5TC63 336 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 DOK6Q6PKX4 331 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 TMEM220Q6QAJ8 160 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 BIRC8Q96P09 236 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 ZDHHC5Q9C0B5 715 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 CCDC68Q9H2F9 335 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 ARRDC1-AS1Q9H2J1 176 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 ZNHIT2Q9UHR6 403 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 GNPTGQ9UJJ9 305 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 PSAT1Q9Y617 370 aa15.21■□□□□ 0.03
COL11A1-204ENST00000427239 A0A1B0GVT2 93 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 KMOO15229 486 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 GRID2O43424 1007 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 DNAJC6O75061 913 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 FUCA1P04066 466 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 CFIP05156 583 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 GSTM1P09488 218 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 SPRP35270 261 aaPredicted RBP15.2■□□□□ 0.02
COL11A1-204ENST00000427239 MPLP40238 635 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 MSH2P43246 934 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 HK3P52790 923 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 MPP1Q00013 466 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 GSTM4Q03013 218 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 BCL7AQ4VC05 210 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 ZNF789Q5FWF6 425 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 CNSTQ6PJW8 725 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 SPATS2Q86XZ4 545 aaKnown RBP15.2■□□□□ 0.02
COL11A1-204ENST00000427239 SLC44A1Q8WWI5 657 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 MCMBPQ9BTE3 642 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 TSSK1BQ9BXA7 367 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 RHOJQ9H4E5 214 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 CAPN10Q9HC96 672 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 CYP4F12Q9HCS2 524 aa15.2■□□□□ 0.02
COL11A1-204ENST00000427239 FGF22Q9HCT0 170 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms