RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 WDR37Q9Y2I8 494 aa13.31□□□□□ -0.28
VEGFB-202ENST00000426086 HIVEP3Q5T1R4 2406 aa13.31□□□□□ -0.28
VEGFB-202ENST00000426086 CHUKO15111 745 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 MFSD11O43934 449 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 ARL4AP40617 200 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 ZNF135P52742 658 aaPredicted RBP13.3□□□□□ -0.28
VEGFB-202ENST00000426086 DRG2P55039 364 aaKnown RBP13.3□□□□□ -0.28
VEGFB-202ENST00000426086 GPS2Q13227 327 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 NR6A1Q15406 480 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 CHRNA6Q15825 494 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 QPCTQ16769 361 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 INSCQ1MX18 579 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 ALS2CLQ60I27 953 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 ABRAXAS1Q6UWZ7 409 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 SYVN1Q86TM6 617 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 TRIM48Q8IWZ4 208 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 AVL9Q8NBF6 648 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 GPR26Q8NDV2 337 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 ENOX1Q8TC92 643 aaKnown RBP13.3□□□□□ -0.28
VEGFB-202ENST00000426086 NSMCE1Q8WV22 266 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 MAML1Q92585 1016 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 MAP3K3Q99759 626 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 POLR1EQ9GZS1 481 aaKnown RBP13.3□□□□□ -0.28
VEGFB-202ENST00000426086 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.3□□□□□ -0.28
VEGFB-202ENST00000426086 FANCLQ9NW38 375 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 SEMA5BQ9P283 1151 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 EPHA6Q9UF33 1036 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 RARRES3Q9UL19 164 aa13.3□□□□□ -0.28
VEGFB-202ENST00000426086 FARSAQ9Y285 508 aaKnown RBP13.3□□□□□ -0.28
VEGFB-202ENST00000426086 PDZK1P1A8MUH7 402 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 ZNF185O15231 689 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 SLC25A14O95258 325 aaPredicted RBP13.29□□□□□ -0.28
VEGFB-202ENST00000426086 CBX6O95503 412 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 HLA-DQB2P05538 268 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 MMP2P08253 660 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 CD48P09326 243 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 ZNF7P17097 686 aaPredicted RBP13.29□□□□□ -0.28
VEGFB-202ENST00000426086 ZNF517Q6ZMY9 492 aaPredicted RBP13.29□□□□□ -0.28
VEGFB-202ENST00000426086 SIDT2Q8NBJ9 832 aaKnown RBP13.29□□□□□ -0.28
VEGFB-202ENST00000426086 GPR150Q8NGU9 434 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 SNRNP40Q96DI7 357 aaKnown RBP13.29□□□□□ -0.28
VEGFB-202ENST00000426086 GPR87Q9BY21 358 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 PCDH9Q9HC56 1237 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 TRIM39Q9HCM9 518 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 PDE7BQ9NP56 450 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 SLAMF7Q9NQ25 335 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 POT1Q9NUX5 634 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 ASF1BQ9NVP2 202 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 RBM22Q9NW64 420 aaKnown RBP eCLIP13.29□□□□□ -0.28
VEGFB-202ENST00000426086 PKD2L2Q9NZM6 624 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 TMPRSS11EQ9UL52 423 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 ZNF451Q9Y4E5 1061 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 TTLL3Q9Y4R7 772 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 TEP1Q99973 2627 aaKnown RBP13.29□□□□□ -0.28
VEGFB-202ENST00000426086 CROCCQ5TZA2 2017 aa13.29□□□□□ -0.28
VEGFB-202ENST00000426086 A6NL46 340 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 LGALS16A8MUM7 142 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 DDX3YO15523 660 aaKnown RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 FTLP02792 175 aaPredicted RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 PIRTP0C851 137 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 ATP1A3P13637 1013 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 PRF1P14222 555 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 FERP16591 822 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 LPOP22079 712 aaPredicted RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 HNRNPH3P31942 346 aaKnown RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 PCK1P35558 622 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 ITGA1P56199 1179 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 RAPSNQ13702 412 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 GPR19Q15760 415 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 PLEKHN1Q494U1 663 aaPredicted RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 ANKRD20A8PQ5CZ79 823 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 E4F1Q66K89 784 aaPredicted RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 APTXQ7Z2E3 356 aaKnown RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 C11orf96Q7Z7L8 435 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 RAVER1Q8IY67 606 aaKnown RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 MR1Q95460 341 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 ZDHHC12Q96GR4 267 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 PPM1MQ96MI6 270 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 ERGIC2Q96RQ1 377 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 MLPHQ9BV36 600 aaPredicted RBP13.28□□□□□ -0.28
VEGFB-202ENST00000426086 SPATA16Q9BXB7 569 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 RAB33BQ9H082 229 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 CHST8Q9H2A9 424 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 FGF21Q9NSA1 209 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 CHMP5Q9NZZ3 219 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 MYO1AQ9UBC5 1043 aa13.28□□□□□ -0.28
VEGFB-202ENST00000426086 ANKRD66B4E2M5 251 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 DDX3XO00571 662 aaKnown RBP eCLIP13.27□□□□□ -0.29
VEGFB-202ENST00000426086 DPM1O60762 260 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 MTA2O94776 668 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 TMEM63AO94886 807 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 RPS15P62841 145 aaKnown RBP13.27□□□□□ -0.29
VEGFB-202ENST00000426086 UBXN1Q04323 297 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 GALNT2Q10471 571 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 GALNT3Q14435 633 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 BOLA3Q53S33 107 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 NCBP2-AS2Q69YL0 99 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 FBXO38Q6PIJ6 1188 aa13.27□□□□□ -0.29
VEGFB-202ENST00000426086 LRRTM4Q86VH4 590 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms