RNA–Protein interactions for RNA: ENST00000423540.6

CXorf40A-205, Transcript of chromosome X open reading frame 40A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXorf40A, Length 1,208 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40A-205ENST00000423540 WDR48Q8TAF3 677 aa13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 NAF1Q96HR8 494 aaKnown RBP13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 ALS2CR12Q96Q35 445 aa13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 OSGEPL1Q9H4B0 414 aa13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 ETNK1Q9HBU6 452 aa13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 ARNT2Q9HBZ2 717 aa13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 ZNF148Q9UQR1 794 aa13.54□□□□□ -0.24
CXorf40A-205ENST00000423540 IGHV1OR21-1A0A087WYE8 117 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 CCDC187A0A096LP49 1063 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 CCDC78A2IDD5 438 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 OR2AG2A6NM03 316 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 C2orf81A6NN90 581 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 KMOO15229 486 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 VEGFDO43915 354 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 AP2A1O95782 977 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 FGGP02679 453 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 F3P13726 295 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 BRAFP15056 766 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 RPL10P27635 214 aaKnown RBP13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 CDKN1CP49918 316 aaPredicted RBP13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 CCDC173Q0VFZ6 552 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 BIRC2Q13490 618 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 POU6F1Q14863 301 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 FAM83HQ6ZRV2 1179 aaPredicted RBP13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 TRAPPC5Q8IUR0 188 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 REXO1L1PQ8IX06 675 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 BEND7Q8N7W2 519 aaPredicted RBP13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 RCBTB1Q8NDN9 531 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 DDHD1Q8NEL9 900 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 OR52K1Q8NGK4 314 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 DTX3LQ8TDB6 740 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 FGF11Q92914 225 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 DNAJC1Q96KC8 554 aaKnown RBP13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 SLC46A1Q96NT5 459 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 ASB8Q9H765 288 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 WDR37Q9Y2I8 494 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 CHD6Q8TD26 2715 aa13.53□□□□□ -0.24
CXorf40A-205ENST00000423540 URB1O60287 2271 aaKnown RBP13.52□□□□□ -0.24
CXorf40A-205ENST00000423540 ACACAQ13085 2346 aa13.52□□□□□ -0.24
CXorf40A-205ENST00000423540 A0A087WV48 116 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 SGTAO43765 313 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 CEP104O60308 925 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 POP7O75817 140 aaKnown RBP13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 TNFSF15O95150 251 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 CRTAMO95727 393 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 ITIH1P19827 911 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 CCKBRP32239 447 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 RPL22P35268 128 aaKnown RBP13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 ACTN2P35609 894 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 ETV5P41161 510 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 GPR3P46089 330 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 FASLGP48023 281 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 KCNJ1P48048 391 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 HHEXQ03014 270 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 CLCA4Q14CN2 919 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 P3H1Q32P28 736 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 MAP9Q49MG5 647 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 CCDC38Q502W7 563 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 PHF19Q5T6S3 580 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 ZDHHC20Q5W0Z9 365 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 TMEM220Q6QAJ8 160 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 XKR5Q6UX68 686 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 RAB11FIP2Q7L804 512 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 TRIM58Q8NG06 486 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 WDR36Q8NI36 951 aaKnown RBP13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 SNIP1Q8TAD8 396 aaKnown RBP13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 SGF29Q96ES7 293 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 LIN37Q96GY3 246 aaPredicted RBP13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 MS4A14Q96JA4 679 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 TIMM29Q9BSF4 260 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 TBC1D10AQ9BXI6 508 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 LRRC40Q9H9A6 602 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 KCNK4Q9NYG8 393 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 SMARCAL1Q9NZC9 954 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 ZNF624Q9P2J8 865 aaPredicted RBP13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 CPNE7Q9UBL6 633 aa13.52□□□□□ -0.25
CXorf40A-205ENST00000423540 IGHV5-10-1A0A0J9YXX1 117 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 OR52A4PA6NMU1 304 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 GPR89AB7ZAQ6 455 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 PLD2O14939 933 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 PPFIA2O75334 1257 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 DXOO77932 396 aaKnown RBP13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 CPNE6O95741 557 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 GPR89BP0CG08 455 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 STIP1P31948 543 aaKnown RBP13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 SLC19A1P41440 591 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 ARSDP51689 593 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 CLCNKAP51800 687 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 UBE2IP63279 158 aaKnown RBP13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 ITGA9Q13797 1035 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 SEPT6Q14141 434 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 CCNG2Q16589 344 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 LDLRAP1Q5SW96 308 aa13.51□□□□□ -0.25
CXorf40A-205ENST00000423540 PIM3Q86V86 326 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms