RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SLC22A4Q9H015 551 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 COMMD3Q9UBI1 195 aa12.26□□□□□ -0.45
CLCN4-203ENST00000421085 TBL1XO60907 577 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 SLC25A12O75746 678 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 KDM4BO94953 1096 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 CKMT2P17540 419 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 CCR10P46092 362 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ARFIP1P53367 373 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF460Q14592 562 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 MYBPC3Q14896 1274 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 UGCGQ16739 394 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 FCRL2Q96LA5 508 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 UBIAD1Q9Y5Z9 338 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF780BQ9Y6R6 833 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 PRODHO43272 600 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 CPNE3O75131 537 aaKnown RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ASLP04424 464 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF806P0C7X5 589 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 DCDC1P59894 354 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 DLG1Q12959 904 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 CRTC2Q53ET0 693 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 RAET1GQ6H3X3 334 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 TUBA3EQ6PEY2 450 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ITFG2Q969R8 447 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 IPPKQ9H8X2 491 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 FBXO10Q9UK96 956 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 TRIM64CA6NLI5 447 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 AP2A1O95782 977 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 FGBP02675 491 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 RAP2AP10114 183 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 AIF1P55008 147 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 DEFA5Q01523 94 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 SMARCB1Q12824 385 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 LCP2Q13094 533 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 TIGD6Q17RP2 521 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 SLC22A16Q86VW1 577 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 HJURPQ8NCD3 748 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 TAS2R7Q9NYW3 318 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 B4GALT5O43286 388 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 IFNW1P05000 195 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 CDH4P55283 916 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 CD83Q01151 205 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 PRKD1Q15139 912 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 SMU1Q2TAY7 513 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 STRADAQ7RTN6 431 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ANKRD23Q86SG2 305 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 FCGR1BQ92637 280 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 DUSP16Q9BY84 665 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 GBA3Q9H227 469 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 NEK6Q9HC98 313 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ADAMDEC1O15204 470 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 MTHFD1P11586 935 aaKnown RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 GPR1P46091 355 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 HUNKP57058 714 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 KLF1Q13351 362 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 RBM48Q5RL73 367 aaKnown RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ZNF572Q7Z3I7 529 aaPredicted RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 VSIG10LQ86VR7 867 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 ANKRD46Q86W74 232 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 LIX1Q8N485 282 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 CLP1Q92989 425 aaKnown RBP12.25□□□□□ -0.45
CLCN4-203ENST00000421085 NUP50Q9UKX7 468 aa12.25□□□□□ -0.45
CLCN4-203ENST00000421085 CCNB2O95067 398 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 MAPK8P45983 427 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 CXCR3P49682 368 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 GPR21Q99679 349 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 RNF38Q9H0F5 515 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 CD320Q9NPF0 282 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 ZDHHC18Q9NUE0 388 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 MTRRQ9UBK8 725 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 GULP1Q9UBP9 304 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 DNAJB9Q9UBS3 223 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 PCDHB9Q9Y5E1 797 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 PDLIM1O00151 329 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 PKMP14618 531 aaKnown RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 MTPNP58546 118 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 IDNKQ5T6J7 187 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 FSTL5Q8N475 847 aaPredicted RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 VGLL2Q8N8G2 317 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 COPS8Q99627 209 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 ANKRA2Q9H9E1 313 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 NPHS1O60500 1241 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 PAGE1O75459 146 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 SLC25A14O95258 325 aaPredicted RBP12.24□□□□□ -0.45
CLCN4-203ENST00000421085 NMBRP28336 390 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 SYCE2Q6PIF2 218 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 PRR23BQ6ZRT6 265 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 BEND5Q7L4P6 421 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 HBEGFQ99075 208 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 FKBP14Q9NWM8 211 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 IKZF2Q9UKS7 526 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 A0A0G2JPF8 293 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 HNRNPCL3B7ZW38 293 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 ZW10O43264 779 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 GCATO75600 419 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 HNRNPCL4P0DMR1 293 aa12.24□□□□□ -0.45
CLCN4-203ENST00000421085 SAGP10523 405 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms