RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ARFGAP1Q8N6T3 406 aa13.54□□□□□ -0.24
SSB-204ENST00000417292 RSC1A1Q92681 617 aa13.54□□□□□ -0.24
SSB-204ENST00000417292 PNPLA2Q96AD5 504 aa13.54□□□□□ -0.24
SSB-204ENST00000417292 SNRNP40Q96DI7 357 aaKnown RBP13.54□□□□□ -0.24
SSB-204ENST00000417292 WDR24Q96S15 920 aa13.54□□□□□ -0.24
SSB-204ENST00000417292 RANBP9Q96S59 729 aa13.54□□□□□ -0.24
SSB-204ENST00000417292 SNRNP25Q9BV90 132 aaKnown RBP13.54□□□□□ -0.24
SSB-204ENST00000417292 ZNF624Q9P2J8 865 aaPredicted RBP13.54□□□□□ -0.24
SSB-204ENST00000417292 MYO1AQ9UBC5 1043 aa13.54□□□□□ -0.24
SSB-204ENST00000417292 LUC7L2Q9Y383 392 aaKnown RBP13.54□□□□□ -0.24
SSB-204ENST00000417292 PCDHGB7Q9Y5F8 929 aa13.54□□□□□ -0.24
SSB-204ENST00000417292 DCHS2Q6V1P9 2916 aa13.54□□□□□ -0.24
SSB-204ENST00000417292 HIVEP1P15822 2718 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 FADS2P1A8MWK0 482 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 FOLR1P15328 257 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 NELFEP18615 380 aaKnown RBP13.53□□□□□ -0.24
SSB-204ENST00000417292 XRCC1P18887 633 aaPredicted RBP13.53□□□□□ -0.24
SSB-204ENST00000417292 VARSP26640 1264 aaKnown RBP13.53□□□□□ -0.24
SSB-204ENST00000417292 MAMLD1Q13495 774 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 DPYSQ14117 519 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 IHHQ14623 411 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 KCNAB1Q14722 419 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 ZRANB3Q5FWF4 1079 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 PPP6R3Q5H9R7 873 aaPredicted RBP13.53□□□□□ -0.24
SSB-204ENST00000417292 ERMARDQ5T6L9 678 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 CYP4V2Q6ZWL3 525 aaPredicted RBP13.53□□□□□ -0.24
SSB-204ENST00000417292 PHYKPLQ8IUZ5 450 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 AVL9Q8NBF6 648 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 TTC13Q8NBP0 860 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 ADAMTS17Q8TE56 1095 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 TRIM7Q9C029 511 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 RMI1Q9H9A7 625 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 ASF1BQ9NVP2 202 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 CWC15Q9P013 229 aaKnown RBP13.53□□□□□ -0.24
SSB-204ENST00000417292 PCSK1NQ9UHG2 260 aa13.53□□□□□ -0.24
SSB-204ENST00000417292 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.24
SSB-204ENST00000417292 A0A0J9YYE9 177 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 EIF3CLB5ME19 914 aaKnown RBP13.52□□□□□ -0.25
SSB-204ENST00000417292 GRID2O43424 1007 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 CBFA2T2O43439 604 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 NUAK1O60285 661 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 MAFKO60675 156 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 VIPP01282 170 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 TRBC1P01850 177 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 SERPING1P05155 500 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 TPM3P06753 285 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 ZNF30P17039 623 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 LPOP22079 712 aaPredicted RBP13.52□□□□□ -0.25
SSB-204ENST00000417292 CAPZBP47756 277 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 CLCNKAP51800 687 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 PPP1CAP62136 330 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 RPS15P62841 145 aaKnown RBP13.52□□□□□ -0.25
SSB-204ENST00000417292 TUBB3Q13509 450 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 PLEKHN1Q494U1 663 aaPredicted RBP13.52□□□□□ -0.25
SSB-204ENST00000417292 PLEKHA7Q6IQ23 1121 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 RHOT1Q8IXI2 618 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 SLC34A3Q8N130 599 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 MARVELD3Q96A59 401 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 ZNF653Q96CK0 615 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 EIF3CQ99613 913 aaKnown RBP13.52□□□□□ -0.25
SSB-204ENST00000417292 OSGEPL1Q9H4B0 414 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 PDE7BQ9NP56 450 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 KLC4Q9NSK0 619 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 SLC23A2Q9UGH3 650 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 RARRES3Q9UL19 164 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 FARSAQ9Y285 508 aaKnown RBP13.52□□□□□ -0.25
SSB-204ENST00000417292 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.251e-7■□□□□ 9.6
SSB-204ENST00000417292 ADGRG1Q9Y653 693 aa13.52□□□□□ -0.25
SSB-204ENST00000417292 A0A087X0T9 212 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 IGHV5-51A0A0C4DH38 117 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 ANKUB1A6NFN9 424 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 A6NL46 340 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 ZNF185O15231 689 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 CLDN7O95471 211 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 FAM228BP0C875 321 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 GZMAP12544 262 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 ZNF8P17098 575 aaPredicted RBP13.51□□□□□ -0.25
SSB-204ENST00000417292 PSMA2P25787 234 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 MMP13P45452 471 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 RALGPS1Q5JS13 557 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 ZNF648Q5T619 568 aaPredicted RBP13.51□□□□□ -0.25
SSB-204ENST00000417292 HENMT1Q5T8I9 393 aaKnown RBP13.51□□□□□ -0.25
SSB-204ENST00000417292 FAM69BQ5VUD6 431 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 IRGCQ6NXR0 463 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 CERS6Q6ZMG9 384 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 ZNF517Q6ZMY9 492 aaPredicted RBP13.51□□□□□ -0.25
SSB-204ENST00000417292 VSTM4Q8IW00 320 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 CISD2Q8N5K1 135 aaKnown RBP13.51□□□□□ -0.25
SSB-204ENST00000417292 SYN2Q92777 582 aaPredicted RBP13.51□□□□□ -0.25
SSB-204ENST00000417292 SLC41A2Q96JW4 573 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 FCRL4Q96PJ5 515 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 UNKQ9C0B0 810 aaKnown RBP13.51□□□□□ -0.25
SSB-204ENST00000417292 RBSNQ9H1K0 784 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 CARD9Q9H257 536 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 PARVAQ9NVD7 372 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 ETNK2Q9NVF9 386 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 SEMA5BQ9P283 1151 aa13.51□□□□□ -0.25
SSB-204ENST00000417292 ATXN10Q9UBB4 475 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms