RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 NKAPQ8N5F7 415 aaKnown RBP20.8■□□□□ 0.92
TPM1-208ENST00000404484 TRAM1L1Q8N609 369 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 HEXDCQ8WVB3 486 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 GPR78Q96P69 363 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 COPS8Q99627 209 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 GABRG3Q99928 467 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 MECRQ9BV79 373 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 TSSK1BQ9BXA7 367 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 SPATA16Q9BXB7 569 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 CKAP5Q14008 2032 aa20.8■□□□□ 0.92
TPM1-208ENST00000404484 F8W8V4 182 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 WNT9AO14904 365 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 GPR39O43194 453 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 C5AR1P21730 350 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 WASP42768 502 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 MRPS21P82921 87 aaKnown RBP20.79■□□□□ 0.92
TPM1-208ENST00000404484 ACOX1Q15067 660 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 CST6Q15828 149 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 ZNF528Q3MIS6 628 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 TMEM52BQ4KMG9 183 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 ATP13A5Q4VNC0 1218 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 ZNF776Q68DI1 518 aaPredicted RBP20.79■□□□□ 0.92
TPM1-208ENST00000404484 FAM47EQ6ZV65 393 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 ZNF765Q7L2R6 523 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 TECPR1Q7Z6L1 1165 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 ZDHHC4Q9NPG8 344 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 XPR1Q9UBH6 696 aa20.79■□□□□ 0.92
TPM1-208ENST00000404484 ZFHX2Q9C0A1 2572 aaPredicted RBP20.78■□□□□ 0.92
TPM1-208ENST00000404484 CCDC189A1A4V9 331 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 CHURC1-FNTBB4DL54 471 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 DNAJC6O75061 913 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 TDGF1P13385 188 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 CHRM3P20309 590 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 ETV3P41162 512 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 GLRBP48167 497 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 LIG3P49916 1009 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 PGGT1BP53609 377 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 TIAL1Q01085 375 aaKnown RBP eCLIP20.78■□□□□ 0.929e-7■■■□□ 18.9
TPM1-208ENST00000404484 DLG1Q12959 904 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 HENMT1Q5T8I9 393 aaKnown RBP20.78■□□□□ 0.92
TPM1-208ENST00000404484 Q6ZVL8 140 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 PIGWQ7Z7B1 504 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 C10orf107Q8IVU9 208 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 CACNA2D3Q8IZS8 1091 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 OR2T3Q8NH03 318 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 RPLP0P6Q8NHW5 317 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 GPR21Q99679 349 aa20.78■□□□□ 0.92
TPM1-208ENST00000404484 IGLV3-16A0A075B6K0 115 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 CFAP99D6REC4 459 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 G3V2L1 256 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 ATG13O75143 517 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 SERPINE1P05121 402 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 KCNA4P22459 653 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 P2RY2P41231 377 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 METAP1P53582 386 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 ATP6V0D1P61421 351 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 STX3Q13277 289 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 C2orf27AQ580R0 203 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 TECRLQ5HYJ1 363 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 MACC1Q6ZN28 852 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 RFLNAQ6ZTI6 216 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 CXorf40AQ8TE69 158 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 CCDC126Q96EE4 140 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 DTD2Q96FN9 168 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 COQ10AQ96MF6 247 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 ELAC2Q9BQ52 826 aaKnown RBP20.77■□□□□ 0.92
TPM1-208ENST00000404484 DERL2Q9GZP9 239 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 SLCO1B3Q9NPD5 702 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 KCTD5Q9NXV2 234 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 CPSF2Q9P2I0 782 aaKnown RBP20.77■□□□□ 0.92
TPM1-208ENST00000404484 CD84Q9UIB8 345 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 ITM2BQ9Y287 266 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 MED16Q9Y2X0 877 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 USP34Q70CQ2 3546 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 PLXNA2O75051 1894 aa20.77■□□□□ 0.92
TPM1-208ENST00000404484 RIF1Q5UIP0 2472 aaKnown RBP20.77■□□□□ 0.92
TPM1-208ENST00000404484 K7ESF4 209 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 TK2O00142 265 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 SPINT1O43278 529 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 AP1G1O43747 822 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 TRIM13O60858 407 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 NIPSNAP2O75323 286 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 TROVE2P10155 538 aaKnown RBP eCLIP20.76■□□□□ 0.91
TPM1-208ENST00000404484 RALBP11234 206 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 NBL1P41271 181 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 BST1Q10588 318 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 CNTN1Q12860 1018 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 HSF5Q4G112 596 aaPredicted RBP20.76■□□□□ 0.91
TPM1-208ENST00000404484 TMEM207Q6UWW9 146 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 ANKS4BQ8N8V4 417 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 CCDC197Q8NCU1 140 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 ANKRD49Q8WVL7 239 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 NELL1Q92832 810 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 DCUN1D1Q96GG9 259 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 C7orf26Q96N11 449 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 VPS35Q96QK1 796 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 WRAP53Q9BUR4 548 aaKnown RBP20.76■□□□□ 0.91
TPM1-208ENST00000404484 OXSMQ9NWU1 459 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 R4GN57 208 aa20.76■□□□□ 0.91
TPM1-208ENST00000404484 TARM1B6A8C7 271 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms