RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SPHK2Q9NRA0 654 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 THEGQ9P2T0 379 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 AP4S1Q9Y587 144 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 UNC80Q8N2C7 3258 aa15.81■□□□□ 0.12
CHRFAM7A-203ENST00000401522 KIF26AQ9ULI4 1882 aaPredicted RBP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MRASO14807 208 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SRP72O76094 671 aaKnown RBP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CNTN5O94779 1100 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CLPTM1O96005 669 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ATXN3P54252 364 aaPredicted RBP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CDKN2DP55273 166 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MAXP61244 160 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ACVR1Q04771 509 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PPP1R3AQ16821 1122 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 IRAK1BP1Q5VVH5 260 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 IL23RQ5VWK5 629 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TMEM25Q86YD3 366 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 YAF2Q8IY57 180 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FAM156AQ8NDB6 213 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 DGCR14Q96DF8 476 aaKnown RBP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TRMT61BQ9BVS5 477 aaKnown RBP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ALG9Q9H6U8 611 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 KCNK12Q9HB15 430 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CCDC167Q9P0B6 97 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MARK1Q9P0L2 795 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LIMD1Q9UGP4 676 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CROTQ9UKG9 612 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 DOCK4Q8N1I0 1966 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 COL6A3P12111 3177 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LOC285095A0A1B0GVY8 99 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TYW5A2RUC4 315 aaKnown RBP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 NRP2O60462 931 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CLDN11O75508 207 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CYBBP04839 570 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FAM58BPP0C7Q3 252 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CHRM1P11229 460 aaPredicted RBP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 FDXRP22570 491 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ARSDP51689 593 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CDH4P55283 916 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 STX1BP61266 288 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HERVK_113P63132 956 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CREB5Q02930 508 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LSAMPQ13449 338 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 C8orf82Q6P1X6 216 aaPredicted RBP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TMEM207Q6UWW9 146 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TPGS1Q6ZTW0 290 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LARP4Q71RC2 724 aaKnown RBP eCLIP15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CHST9Q7L1S5 443 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ISCA2Q86U28 154 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ARRDC2Q8TBH0 407 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 DDI1Q8WTU0 396 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 C19orf60Q96EN9 201 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ZFYVE19Q96K21 471 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CNBD2Q96M20 576 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ERVK-6Q9BXR3 956 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TMEM181Q9P2C4 612 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CD300AQ9UGN4 299 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PADI4Q9UM07 663 aa15.8■□□□□ 0.12
CHRFAM7A-203ENST00000401522 A0A1B0GVM2 712 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TCRBV3S1A0A5B6 114 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 BBIP1A8MTZ0 92 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LOC730098B7Z3J9 87 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 UBFD1O14562 309 aaKnown RBP15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LDB2O43679 373 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SUPT7LO94864 414 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 NFATC1O95644 943 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ATXN1LP0C7T5 689 aaKnown RBP15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SLC7A1P30825 629 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 IL10RBQ08334 325 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 DHCR24Q15392 516 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 UNC50Q53HI1 259 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LY6G5CQ5SRR4 150 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 C6orf52Q5T4I8 152 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PAOXQ6QHF9 649 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RPS27LQ71UM5 84 aaKnown RBP15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CLYBLQ8N0X4 340 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 GALNT4Q8N4A0 578 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 GPR150Q8NGU9 434 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 LPGAT1Q92604 370 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ATP6V1E2Q96A05 226 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PBXIP1Q96AQ6 731 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 EME1Q96AY2 570 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ROPN1LQ96C74 230 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 EFHD1Q9BUP0 239 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 SLC2A11Q9BYW1 496 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 POPDC3Q9HBV1 291 aa15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MARCH4Q9P2E8 410 aaPredicted RBP15.79■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ARNTLO00327 626 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CLGNO14967 610 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 TBL1XO60907 577 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PGM3O95394 542 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 STAMBPO95630 424 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CYP17A1P05093 508 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 HOXD9P28356 352 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CDKL1Q00532 357 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 MYBPC1Q00872 1141 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 PARP15Q460N3 678 aa15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 RAB44Q7Z6P3 723 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 CIR1Q86X95 450 aaPredicted RBP15.78■□□□□ 0.12
CHRFAM7A-203ENST00000401522 ZNF354CQ86Y25 554 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms