RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 POU3F3P20264 500 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ITGB7P26010 798 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 TSFMP43897 325 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 DSC2Q02487 901 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 TRAF2Q12933 501 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 INTS11Q5TA45 600 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ERAP2Q6P179 960 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 UNC5DQ6UXZ4 953 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 TXNDC5Q8NBS9 432 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SPATA22Q8NHS9 363 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 TRPC4APQ8TEL6 797 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 PWWP2AQ96N64 755 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 KLHL5Q96PQ7 755 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 THUMPD1Q9NXG2 353 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 PCDHB9Q9Y5E1 797 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 GPR179Q6PRD1 2367 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 CLASP2O75122 1294 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SPAG7O75391 227 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SNRPB2P08579 225 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 PTX3P26022 381 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 KLC1Q07866 573 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SEMA3AQ14563 771 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 COL19A1Q14993 1142 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 CMC1Q7Z7K0 106 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 OIT3Q8WWZ8 545 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF419Q96HQ0 510 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 TMEM209Q96SK2 561 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 PARVBQ9HBI1 364 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 IGSF5Q9NSI5 407 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ACTR3BQ9P1U1 418 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 BAIAP2L1Q9UHR4 511 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 TSPAN6O43657 245 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 RETP07949 1114 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HIST1H2AGP0C0S8 130 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HIST1H2ADP20671 130 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 CXCR2P25025 360 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 CCT8P50990 548 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ECT2LQ008S8 904 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 IKBIPQ70UQ0 350 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF483Q8TF39 744 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 NRBF2Q96F24 287 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 DNAJC1Q96KC8 554 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HIST1H2AHQ96KK5 128 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HIST1H2AJQ99878 128 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HEPHQ9BQS7 1158 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 H2AFJQ9BTM1 129 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 FAM83DQ9H4H8 585 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 NT5DC2Q9H857 520 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 PCDHGA11Q9Y5H2 935 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HNRNPRO43390 633 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 IL6P05231 212 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SLC7A1P30825 629 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 MMP12P39900 470 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 BCL7AQ4VC05 210 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 LCN8Q6JVE9 175 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ERICH5Q6P6B1 374 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SBSNQ6UWP8 590 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 RSPO2Q6UXX9 243 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ZBTB18Q99592 522 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ERVW-1Q9UQF0 538 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 URB1O60287 2271 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 UPK3BL1B0FP48 263 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 UPK3BL2E5RIL1 263 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 TRIM38O00635 465 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HCRTO43612 131 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 GMNNO75496 209 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 COX4I1P13073 169 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 MYLK3Q32MK0 819 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF678Q5SXM1 525 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 FBXL19Q6PCT2 694 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 GPRIN3Q6ZVF9 776 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HMGCLL1Q8TB92 370 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SPPL3Q8TCT6 385 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SETD7Q8WTS6 366 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 MIPEPQ99797 713 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 VN1R3Q9BXE9 311 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 MUC3BQ9H195 1237 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 UNC13CQ8NB66 2214 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 FAM234BA2RU67 622 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 H0YIV9 168 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 DEAF1O75398 565 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SLITRK5O94991 958 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 HNRNPLP14866 589 aaKnown RBP eCLIP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 GABRR2P28476 465 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 MTHFRP42898 656 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 RAB15P59190 212 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ST8SIA6P61647 398 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 RBBP4Q09028 425 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 CCDC6Q16204 474 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF284Q2VY69 593 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 C10orf107Q8IVU9 208 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SLC30A8Q8IWU4 369 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 MFSD2AQ8NA29 543 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 USP7Q93009 1102 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 UTP4Q969X6 686 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 PHF12Q96QT6 1004 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 GPATCH1Q9BRR8 931 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 NDFIP2Q9NV92 336 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 DCTN4Q9UJW0 460 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 EDDM13A0A1B0GTR0 161 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms