RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 TWF1Q12792 350 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 TSNQ15631 228 aaKnown RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 ARMC12Q5T9G4 340 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 RETSATQ6NUM9 610 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 TAS2R42Q7RTR8 314 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 GALNT13Q8IUC8 556 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 GALNT15Q8N3T1 639 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 PAF1Q8N7H5 531 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 TMEM102Q8N9M5 508 aaPredicted RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 MDGA1Q8NFP4 955 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 AUTS2Q8WXX7 1259 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 FUBP1Q96AE4 644 aaKnown RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 MYEOVQ96EZ4 313 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 LINGO1Q96FE5 620 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 KLHL32Q96NJ5 620 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ZNF382Q96SR6 550 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 EMILIN2Q9BXX0 1053 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ZNF696Q9H7X3 374 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ZIM2Q9NZV7 527 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 POLG2Q9UHN1 485 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 GNPTGQ9UJJ9 305 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 APPL1Q9UKG1 709 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ZNF711Q9Y462 761 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 COMMD3-BMI1R4GMX3 469 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ATP6AP2A0A1C7CYW4 349 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 A0A1W2PP18 115 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ARHGAP10A1A4S6 786 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 PRORSD1PA6NEY8 169 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 PRMT5O14744 637 aaPredicted RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 TEX28O15482 410 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ATP6AP2O75787 350 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 SIX3O95343 332 aaPredicted RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 SEC24AO95486 1093 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 CLPTM1O96005 669 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 GPIP06744 558 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ALDOCP09972 364 aaKnown RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 IRF1P10914 325 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 UMPSP11172 480 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 MBL2P11226 248 aaPredicted RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 TSPAN8P19075 237 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 RPS3P23396 243 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBR4-203ENST00000375225 ERVK-8P63133 956 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 UBE3AQ05086 875 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 MAD2L1Q13257 205 aaPredicted RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 PTPRCAPQ14761 206 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ATP6AP1LQ52LC2 224 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 IL23RQ5VWK5 629 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 PTRHD1Q6GMV3 140 aaKnown RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 METTL2BQ6P1Q9 378 aaKnown RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 LAYNQ6UX15 382 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 RPS27LQ71UM5 84 aaKnown RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 TCEAL8Q8IYN2 117 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 CARNMT1Q8N4J0 409 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ANKFN1Q8N957 763 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 DCAF4L2Q8NA75 395 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 HMGCLL1Q8TB92 370 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ATP6V1E2Q96A05 226 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 GPATCH1Q9BRR8 931 aaKnown RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 C2orf49Q9BVC5 232 aaPredicted RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 SPATA16Q9BXB7 569 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 CLPBQ9H078 707 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 SEMA4BQ9NPR2 832 aaPredicted RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 AIG1Q9NVV5 245 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ACTR3BQ9P1U1 418 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 FKBPLQ9UIM3 349 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 PCTPQ9UKL6 214 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 CXorf51AA0A1B0GTR3 108 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 FAM234BA2RU67 622 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 LINC01553A4QN01 128 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 CCDC154A6NI56 674 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 TBL1XO60907 577 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 LILRB3O75022 631 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 GJB3O75712 270 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 SLC22A3O75751 556 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 RNASEH2AO75792 299 aaKnown RBP12.1□□□□□ -0.47
UBR4-203ENST00000375225 CXCL14O95715 111 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 PRLP01236 227 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 F11P03951 625 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 LINC00032P0C843 101 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 C7P10643 843 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 HMGA1P17096 107 aaKnown RBP12.1□□□□□ -0.47
UBR4-203ENST00000375225 MSH3P20585 1137 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 ITGALP20701 1170 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 MSX2P35548 267 aaPredicted RBP12.1□□□□□ -0.47
UBR4-203ENST00000375225 RGRP47804 291 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 CCNHP51946 323 aaPredicted RBP12.1□□□□□ -0.47
UBR4-203ENST00000375225 PTPN5P54829 565 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 POLE2P56282 527 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 EEFSECP57772 596 aaKnown RBP12.1□□□□□ -0.47
UBR4-203ENST00000375225 CDH18Q13634 790 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 NFYCQ13952 458 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 TLR1Q15399 786 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 TTLL9Q3SXZ7 439 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 LCN8Q6JVE9 175 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 CCDC149Q6ZUS6 474 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 PROSER1Q86XN7 944 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 RBFAQ8N0V3 343 aa12.1□□□□□ -0.47
UBR4-203ENST00000375225 MYO1HQ8N1T3 1032 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms