RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 PAMP19021 973 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 PSMA3P25788 255 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 NMBRP28336 390 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 FOXN2P32314 431 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 CA5AP35218 305 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 ITGA8P53708 1063 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 ACVR1Q04771 509 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 DNAJC3Q13217 504 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 NR0B2Q15466 257 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 FASTKD1Q53R41 847 aaKnown RBP14.64□□□□□ -0.07
COL9A1-204ENST00000370496 DNAJC21Q5F1R6 531 aaKnown RBP14.64□□□□□ -0.07
COL9A1-204ENST00000370496 ARMC3Q5W041 872 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 MICALCLQ6ZW33 695 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 GLRX5Q86SX6 157 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 SERPINA9Q86WD7 417 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 MPP5Q8N3R9 675 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 FAM181AQ8N9Y4 354 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 HEXDCQ8WVB3 486 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 ZNF669Q96BR6 464 aaPredicted RBP14.64□□□□□ -0.07
COL9A1-204ENST00000370496 KIFC1Q9BW19 673 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 BOCQ9BWV1 1114 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 RAB17Q9H0T7 212 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 DPH5Q9H2P9 285 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 CATSPERZQ9NTU4 200 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 ZDHHC3Q9NYG2 299 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 GULP1Q9UBP9 304 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 APOBEC2Q9Y235 224 aaKnown RBP14.64□□□□□ -0.07
COL9A1-204ENST00000370496 KCNK6Q9Y257 313 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 UTP11Q9Y3A2 253 aaKnown RBP14.64□□□□□ -0.07
COL9A1-204ENST00000370496 PLEKHM1Q9Y4G2 1056 aa14.64□□□□□ -0.07
COL9A1-204ENST00000370496 ARID1BQ8NFD5 2236 aaPredicted RBP14.63□□□□□ -0.07
COL9A1-204ENST00000370496 TRBV5-4A0A0C4DH59 114 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 AGAP14A8MT82 685 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 SMAPO00193 183 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 CKMT2P17540 419 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 VCLP18206 1134 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 IVDP26440 423 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 PBLDP30039 288 aaPredicted RBP14.63□□□□□ -0.07
COL9A1-204ENST00000370496 MAGEA3P43357 314 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 RPL21P46778 160 aaKnown RBP14.63□□□□□ -0.07
COL9A1-204ENST00000370496 ACADVLP49748 655 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 CDKN1CP49918 316 aaPredicted RBP14.63□□□□□ -0.07
COL9A1-204ENST00000370496 DUSP3P51452 185 aaPredicted RBP14.63□□□□□ -0.07
COL9A1-204ENST00000370496 CTSCP53634 463 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 CALCOCO2Q13137 446 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 SMAD1Q15797 465 aaKnown RBP14.63□□□□□ -0.07
COL9A1-204ENST00000370496 DBN1Q16643 649 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 AARS2Q5JTZ9 985 aaKnown RBP14.63□□□□□ -0.07
COL9A1-204ENST00000370496 FNBP1LQ5T0N5 605 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 CES3Q6UWW8 571 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 NRROSQ86YC3 692 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 SLC35F3Q8IY50 421 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 PDIK1LQ8N165 341 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 RASGEF1AQ8N9B8 481 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 BBOF1Q8ND07 529 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 OR4L1Q8NH43 312 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 MFSD3Q96ES6 412 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 ZNF514Q96K75 400 aaPredicted RBP14.63□□□□□ -0.07
COL9A1-204ENST00000370496 TTC1Q99614 292 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 TIMM29Q9BSF4 260 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 TREX1Q9NSU2 369 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 ANAPC5Q9UJX4 755 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 SNX24Q9Y343 169 aa14.63□□□□□ -0.07
COL9A1-204ENST00000370496 CTAGE15A4D2H0 777 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 RFPL3O75679 317 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 CTAGE8P0CG41 777 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 CKMT1AP12532 417 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 MYF5P13349 255 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 ZNF7P17097 686 aaPredicted RBP14.62□□□□□ -0.07
COL9A1-204ENST00000370496 BIRC2Q13490 618 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 HIF1AQ16665 826 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 BBS9Q3SYG4 887 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 HIBCHQ6NVY1 386 aaPredicted RBP14.62□□□□□ -0.07
COL9A1-204ENST00000370496 TMEM220Q6QAJ8 160 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 CTAGE6Q86UF2 777 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 ZNF547Q8IVP9 402 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 CTAGE4Q8IX94 777 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 PIANPQ8IYJ0 282 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 ZDHHC1Q8WTX9 485 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 NAT6Q93015 286 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 STAMBPL1Q96FJ0 436 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 ERP44Q9BS26 406 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 KLC4Q9NSK0 619 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 FAM8A1Q9UBU6 413 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 DNAJC16Q9Y2G8 782 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 ST14Q9Y5Y6 855 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 RPS6KL1Q9Y6S9 549 aa14.62□□□□□ -0.07
COL9A1-204ENST00000370496 CNOT1A5YKK6 2376 aaKnown RBP14.62□□□□□ -0.07
COL9A1-204ENST00000370496 FAM237BA0A1B0GVD1 139 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 CPED1A4D0V7 1026 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 PDZK1P1A8MUH7 402 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 SNX2O60749 519 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 VAPBO95292 243 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 PGAM1P18669 254 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 ACP1P24666 158 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 PPARGP37231 505 aaPredicted RBP14.61□□□□□ -0.07
COL9A1-204ENST00000370496 ARL4CP56559 192 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 B4GALNT1Q00973 533 aa14.61□□□□□ -0.07
COL9A1-204ENST00000370496 DHX9Q08211 1270 aaKnown RBP14.61□□□□□ -0.07
COL9A1-204ENST00000370496 ITIH4Q14624 930 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms