RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 COL5A1P20908 1838 aaPredicted RBP13.6□□□□□ -0.23
SSR4-202ENST00000370085 TRBV5-4A0A0C4DH59 114 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 CCDC162PA2VCL2 907 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 CCL22O00626 93 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 TM4SF5O14894 197 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 CHUKO15111 745 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 YY2O15391 372 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 TNFSF14O43557 240 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 MTX2O75431 263 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 USP1O94782 785 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 CDK4P11802 303 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 PGAM1P18669 254 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 KCNA4P22459 653 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 ACTR1BP42025 376 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 NSG1P42857 185 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 RPL21P46778 160 aaKnown RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 ARSDP51689 593 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 DRG2P55039 364 aaKnown RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 ACTR1AP61163 376 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 CTBSQ01459 385 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 BIRC2Q13490 618 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 THOC5Q13769 683 aaKnown RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 ITIH4Q14624 930 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 TRIP6Q15654 476 aaKnown RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 BBS9Q3SYG4 887 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 C6orf132Q5T0Z8 1188 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 DUPD1Q68J44 220 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 KIAA0930Q6ICG6 404 aaPredicted RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 ZNF449Q6P9G9 518 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 CEP128Q6ZU80 1094 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 CENPUQ71F23 418 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 KANSL1Q7Z3B3 1105 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 FAM181AQ8N9Y4 354 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 OR6C4Q8NGE1 309 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 CALML6Q8TD86 181 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 ZNF669Q96BR6 464 aaPredicted RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 ZNF778Q96MU6 729 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 TIMM29Q9BSF4 260 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 TSSK1BQ9BXA7 367 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 FAM129AQ9BZQ8 928 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 CLPBQ9H078 707 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 DPEP2Q9H4A9 486 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 FAM96AQ9H5X1 160 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 SLC2A6Q9UGQ3 507 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 PNMA8BQ9ULN7 279 aaPredicted RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 APOBEC2Q9Y235 224 aaKnown RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 VPS9D1Q9Y2B5 631 aa13.59□□□□□ -0.23
SSR4-202ENST00000370085 ARID1BQ8NFD5 2236 aaPredicted RBP13.59□□□□□ -0.23
SSR4-202ENST00000370085 BPTFQ12830 3046 aa13.58□□□□□ -0.23
SSR4-202ENST00000370085 ZFC3H1O60293 1989 aaKnown RBP13.58□□□□□ -0.24
SSR4-202ENST00000370085 CD3EAPO15446 510 aaKnown RBP13.58□□□□□ -0.24
SSR4-202ENST00000370085 ZW10O43264 779 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 SIGLEC6O43699 453 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 AP2A2O94973 939 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 VAPBO95292 243 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 GSTM1P09488 218 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 ACP5P13686 325 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 ATP1B2P14415 290 aaPredicted RBP13.58□□□□□ -0.24
SSR4-202ENST00000370085 ZNF7P17097 686 aaPredicted RBP13.58□□□□□ -0.24
SSR4-202ENST00000370085 CKMT2P17540 419 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 NMBRP28336 390 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 FOXN2P32314 431 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 GSTM4Q03013 218 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 NR0B2Q15466 257 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 TCEA2Q15560 299 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 ANKRD20A4Q4UJ75 823 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 ZNF648Q5T619 568 aaPredicted RBP13.58□□□□□ -0.24
SSR4-202ENST00000370085 RNF187Q5TA31 235 aaPredicted RBP13.58□□□□□ -0.24
SSR4-202ENST00000370085 PSAPL1Q6NUJ1 521 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 SLC30A9Q6PML9 568 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 CRTC3Q6UUV7 619 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 AMZ2Q86W34 360 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 LMNTD2Q8IXW0 634 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 ARL10Q8N8L6 244 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 AVL9Q8NBF6 648 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
SSR4-202ENST00000370085 MFSD3Q96ES6 412 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 SIGLEC10Q96LC7 697 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 EBNA1BP2Q99848 306 aaKnown RBP13.58□□□□□ -0.24
SSR4-202ENST00000370085 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 OSGEPL1Q9H4B0 414 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 STN1Q9H668 368 aaKnown RBP13.58□□□□□ -0.24
SSR4-202ENST00000370085 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 TMPRSS11EQ9UL52 423 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 BTBD3Q9Y2F9 522 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 PLXNB3Q9ULL4 1909 aa13.58□□□□□ -0.24
SSR4-202ENST00000370085 IGLV3-16A0A075B6K0 115 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 DCDC2BA2VCK2 349 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 OR2AG2A6NM03 316 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 EIF3HO15372 352 aaKnown RBP eCLIP13.57□□□□□ -0.24
SSR4-202ENST00000370085 GPR39O43194 453 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 CBFA2T3O75081 653 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 NDUFS3O75489 264 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 KCNK5O95279 499 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 FUCA1P04066 466 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 OR56A5P0C7T3 313 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 IDSP22304 550 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 CLCNKAP51800 687 aa13.57□□□□□ -0.24
SSR4-202ENST00000370085 MRPS25P82663 173 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms