RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TMEM63AO94886 807 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 BAG4O95429 457 aaKnown RBP4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 NR2F2P24468 414 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 MBTD1Q05BQ5 628 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 ADIPOQQ15848 244 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 WDR38Q5JTN6 314 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 FAM72AQ5TYM5 149 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 FAM72DQ6L9T8 149 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 SLC27A1Q6PCB7 646 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 NCEH1Q6PIU2 408 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 CEACAM20Q6UY09 585 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 FAM72BQ86X60 149 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 PM20D2Q8IYS1 436 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 PAF1Q8N7H5 531 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 OR10V1Q8NGI7 309 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 GSDMBQ8TAX9 411 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 GRAPLQ8TC17 118 aaPredicted RBP4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 FCAMRQ8WWV6 532 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 GFI1Q99684 422 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 SIL1Q9H173 461 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 SEMA6AQ9H2E6 1030 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 OLA1Q9NTK5 396 aaKnown RBP4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 FBXW11Q9UKB1 542 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 JRKLQ9Y4A0 524 aa4.26□□□□□ -1.73
RNU4-28P-201ENST00000364739 KANSL1LA0AUZ9 987 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 TMEM189-UBE2V1I3L0A0 370 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 NTN3O00634 580 aaPredicted RBP4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 ZBTB43O43298 467 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 ZNF217O75362 1048 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 CCNDBP1O95273 360 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 APOHP02749 345 aaPredicted RBP4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 TFAP2AP05549 437 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 CSF2RAP15509 400 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 PAX1P15863 534 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 ACADLP28330 430 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 ATP12AP54707 1039 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 ZBED6P86452 979 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 UBE2V1Q13404 147 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 ACVR2BQ13705 512 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 EIF4A2Q14240 407 aaKnown RBP4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 CCDC70Q6NSX1 233 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 ADAM5Q6NVV9 412 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 PLEKHM3Q6ZWE6 761 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 IKBIPQ70UQ0 350 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 FOXP4Q8IVH2 680 aaPredicted RBP4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 CEP97Q8IW35 865 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 RNF168Q8IYW5 571 aaPredicted RBP4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 SLC38A9Q8NBW4 561 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 SGCDQ92629 289 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 CMTM3Q96MX0 182 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 PSD2Q9BQI7 771 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 ITPAQ9BY32 194 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 MAGIXQ9H6Y5 334 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 MBNL1Q9NR56 388 aaKnown RBP4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 DIAPH3Q9NSV4 1193 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 TSPYL4Q9UJ04 414 aa4.25□□□□□ -1.73
RNU4-28P-201ENST00000364739 J3QR06 171 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 EPB41L2O43491 1005 aaKnown RBP4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 PRKNO60260 465 aaPredicted RBP4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 BMP10O95393 424 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 CGAP01215 116 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 LIPFP07098 398 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 TNFAIP3P21580 790 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 MAN1A1P33908 653 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 PPARGP37231 505 aaPredicted RBP4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 MSH2P43246 934 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 HILS1P60008 231 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 PPP2R2BQ00005 443 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 GAGE5Q13069 117 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 GAGE6Q13070 117 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 C14orf177Q52M58 125 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 SOWAHCQ53LP3 525 aaPredicted RBP4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 SNX30Q5VWJ9 437 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 KIAA0930Q6ICG6 404 aaPredicted RBP4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 SLC35E4Q6ICL7 350 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 KLHL35Q6PF15 583 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 TSPAN33Q86UF1 283 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 STPG4Q8N801 248 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 DUX3Q96PT4 197 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 F2RL3Q96RI0 385 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 FTOQ9C0B1 505 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 TMEM39BQ9GZU3 492 aa4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 BICC1Q9H694 974 aaKnown RBP4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 UBA2Q9UBT2 640 aaPredicted RBP4.24□□□□□ -1.73
RNU4-28P-201ENST00000364739 A0A0G2JNG1 304 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 FRMD3A2A2Y4 597 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 DUXAA6NLW8 204 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 PLK4O00444 970 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 PATE4P0C8F1 98 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 MSH3P20585 1137 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 MCCP23508 829 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 SPOCK1Q08629 439 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 KIR2DS5Q14953 304 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 RAB6CQ53S08 254 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 SFMBT2Q5VUG0 894 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 CCDC30Q5VVM6 783 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 ARHGAP17Q68EM7 881 aa4.23□□□□□ -1.73
RNU4-28P-201ENST00000364739 WDTC1Q8N5D0 677 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms