RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 NUDT5Q9UKK9 219 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 ARL5AQ9Y689 179 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 GBF1Q92538 1859 aa17.55■□□□□ 0.4
RTN4-204ENST00000357732 ZFC3H1O60293 1989 aaKnown RBP17.55■□□□□ 0.4
RTN4-204ENST00000357732 SOBPA7XYQ1 873 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 PFDN6O15212 129 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 KATNA1O75449 491 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 CLIC3O95833 236 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 MAP4P27816 1152 aaKnown RBP17.54■□□□□ 0.4
RTN4-204ENST00000357732 GABARAPL2P60520 117 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 PURAQ00577 322 aaKnown RBP17.54■□□□□ 0.4
RTN4-204ENST00000357732 POLD3Q15054 466 aaPredicted RBP17.54■□□□□ 0.4
RTN4-204ENST00000357732 LINC00299Q6ZSB3 139 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 GALNT13Q8IUC8 556 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 ZBTB8BQ8NAP8 495 aaPredicted RBP17.54■□□□□ 0.4
RTN4-204ENST00000357732 CHPT1Q8WUD6 406 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 CDKN2AIPNLQ96HQ2 116 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 ZNF382Q96SR6 550 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 CENPFP49454 3210 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 KPNA6O60684 536 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 NDST3O95803 873 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 ALPLP05186 524 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 THRBP10828 461 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 UGT1A1P22309 533 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 UGT1A4P22310 534 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 GSTM2P28161 218 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 UGT1A3P35503 534 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 UGT1A5P35504 534 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 UFM1P61960 85 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 YBX1P67809 324 aaKnown RBP17.54■□□□□ 0.4
RTN4-204ENST00000357732 SLC44A4Q53GD3 710 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 ALFQ53S48 1182 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 GLYATQ6IB77 296 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 PAQR3Q6TCH7 311 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 THAP5Q7Z6K1 395 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 SYVN1Q86TM6 617 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 HOMEZQ8IX15 550 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 HDAC2Q92769 488 aaKnown RBP17.54■□□□□ 0.4
RTN4-204ENST00000357732 FUBP3Q96I24 572 aaKnown RBP eCLIP17.54■□□□□ 0.42e-9■■■□□ 14.6
RTN4-204ENST00000357732 TEX37Q96LM6 180 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 RNF145Q96MT1 663 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 COMMD8Q9NX08 183 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 BLOC1S6Q9UL45 172 aa17.54■□□□□ 0.4
RTN4-204ENST00000357732 C9JVG2 144 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 PRAMEF11O60813 436 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 POMCP01189 267 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 SERPINF2P08697 491 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 NCK1P16333 377 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 ZNF235Q14590 738 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 SKIV2LQ15477 1246 aaKnown RBP17.53■□□□□ 0.4
RTN4-204ENST00000357732 NEDD8Q15843 81 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 FAM219BQ5XKK7 198 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 DCDC5Q6ZRR9 648 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 GPRIN3Q6ZVF9 776 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 RNF168Q8IYW5 571 aaPredicted RBP17.53■□□□□ 0.4
RTN4-204ENST00000357732 OR8J3Q8NGG0 315 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 ING2Q9H160 280 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 RETREG1Q9H6L5 497 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 OLA1Q9NTK5 396 aaKnown RBP17.53■□□□□ 0.4
RTN4-204ENST00000357732 PSME2Q9UL46 239 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 MYADML2A6NDP7 307 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 GMNNO75496 209 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 BCL10O95999 233 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 ANXA6P08133 673 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 APLP1P51693 650 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 YWHAHQ04917 246 aaPredicted RBP17.53■□□□□ 0.4
RTN4-204ENST00000357732 TSNQ15631 228 aaKnown RBP17.53■□□□□ 0.4
RTN4-204ENST00000357732 ATP6AP1LQ52LC2 224 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 SETMARQ53H47 684 aaPredicted RBP17.53■□□□□ 0.4
RTN4-204ENST00000357732 C6orf136Q5SQH8 315 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 OR52E4Q8NGH9 312 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 OR13C4Q8NGS5 318 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 PROKR1Q8TCW9 393 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 SDCCAG3Q96C92 435 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 C8orf48Q96LL4 319 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 HGH1Q9BTY7 390 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 UGT2B28Q9BY64 529 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 NTN4Q9HB63 628 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 ZFYVE28Q9HCC9 887 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 PCDHB8Q9UN66 801 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 AP3M1Q9Y2T2 418 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 MED16Q9Y2X0 877 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 COMMD10Q9Y6G5 202 aa17.53■□□□□ 0.4
RTN4-204ENST00000357732 UPK1AO00322 258 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 CNTN5O94779 1100 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 ZNF140P52738 457 aaPredicted RBP17.52■□□□□ 0.4
RTN4-204ENST00000357732 CHRNB3Q05901 458 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 TOP3AQ13472 1001 aaPredicted RBP17.52■□□□□ 0.4
RTN4-204ENST00000357732 TRIP4Q15650 581 aaPredicted RBP17.52■□□□□ 0.4
RTN4-204ENST00000357732 FUT11Q495W5 492 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 TIGD2Q4W5G0 525 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 C16orf87Q6PH81 154 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 C8orf59Q8N0T1 100 aaPredicted RBP17.52■□□□□ 0.4
RTN4-204ENST00000357732 SNRNP27Q8WVK2 155 aaKnown RBP17.52■□□□□ 0.4
RTN4-204ENST00000357732 MUS81Q96NY9 551 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 GORASP2Q9H8Y8 452 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 TIMM22Q9Y584 194 aa17.52■□□□□ 0.4
RTN4-204ENST00000357732 A0A1B0GTL3 188 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 H0Y858 1186 aa17.52■□□□□ 0.39
RTN4-204ENST00000357732 VPS26AO75436 327 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms