RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PRKCIP41743 596 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 PER3P56645 1201 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 OGDHQ02218 1023 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 PTSQ03393 145 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 KLHL30Q0D2K2 578 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 TRAF2Q12933 501 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 ZNF235Q14590 738 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 KCNAB1Q14722 419 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 ZRSR2Q15696 482 aaKnown RBP15.6■□□□□ 0.09
DDX55-202ENST00000354291 KYNUQ16719 465 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 ERMARDQ5T6L9 678 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 LRRC66Q68CR7 880 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 PRSS42Q7Z5A4 293 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 PHYKPLQ8IUZ5 450 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 ARHGAP12Q8IWW6 846 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 ARFGAP1Q8N6T3 406 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 SIDT2Q8NBJ9 832 aaKnown RBP15.6■□□□□ 0.09
DDX55-202ENST00000354291 ZDHHC12Q96GR4 267 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 SMIM14Q96QK8 99 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 UCK1Q9HA47 277 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 SCHIP1Q9P0W5 487 aaPredicted RBP15.6■□□□□ 0.09
DDX55-202ENST00000354291 B3GNT3Q9Y2A9 372 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 NAV3Q8IVL0 2385 aa15.6■□□□□ 0.09
DDX55-202ENST00000354291 TMEM191CA6NGB0 347 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 EEF2KO00418 725 aaKnown RBP15.59■□□□□ 0.09
DDX55-202ENST00000354291 ZG16O60844 167 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 SERPINC1P01008 464 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 PYGLP06737 847 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 SLC19A1P41440 591 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 GLRBP48167 497 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 LAMB3Q13751 1172 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 KRTAP21-3Q3LHN1 58 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 ARMC12Q5T9G4 340 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 FAM69BQ5VUD6 431 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 ZNF571Q7Z3V5 609 aaPredicted RBP15.59■□□□□ 0.09
DDX55-202ENST00000354291 NLRP8Q86W28 1048 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 RSC1A1Q92681 617 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 NAP1L5Q96NT1 182 aaPredicted RBP15.59■□□□□ 0.09
DDX55-202ENST00000354291 MCCC1Q96RQ3 725 aaPredicted RBP15.59■□□□□ 0.09
DDX55-202ENST00000354291 NUDCD1Q96RS6 583 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 SMAD5Q99717 465 aaKnown RBP15.59■□□□□ 0.09
DDX55-202ENST00000354291 MLPHQ9BV36 600 aaPredicted RBP15.59■□□□□ 0.09
DDX55-202ENST00000354291 ILKAPQ9H0C8 392 aaPredicted RBP15.59■□□□□ 0.09
DDX55-202ENST00000354291 KLC4Q9NSK0 619 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 VPS18Q9P253 973 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 SNX7Q9UNH6 387 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 AP4E1Q9UPM8 1137 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 OSGIN2Q9Y236 505 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 MED13LQ71F56 2210 aa15.59■□□□□ 0.09
DDX55-202ENST00000354291 DCHS2Q6V1P9 2916 aa15.58■□□□□ 0.09
DDX55-202ENST00000354291 MDC1Q14676 2089 aaKnown RBP15.58■□□□□ 0.09
DDX55-202ENST00000354291 GRID2O43424 1007 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 PRPSAP2O60256 369 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 PGLSO95336 258 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 XRCC1P18887 633 aaPredicted RBP15.58■□□□□ 0.08
DDX55-202ENST00000354291 ZNF135P52742 658 aaPredicted RBP15.58■□□□□ 0.08
DDX55-202ENST00000354291 MAXP61244 160 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 TPM4P67936 248 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 NR1I3Q14994 352 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 IQCB1Q15051 598 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 ZNF765Q7L2R6 523 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 PSTKQ8IV42 348 aaKnown RBP15.58■□□□□ 0.08
DDX55-202ENST00000354291 NDUFAF2Q8N183 169 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 PGBD5Q8N414 524 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 ADAMTS17Q8TE56 1095 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 TRIM11Q96F44 468 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 FCRL4Q96PJ5 515 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 CHST8Q9H2A9 424 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 DHX35Q9H5Z1 703 aaKnown RBP15.58■□□□□ 0.08
DDX55-202ENST00000354291 RMI1Q9H9A7 625 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 MRPL47Q9HD33 250 aaKnown RBP15.58■□□□□ 0.08
DDX55-202ENST00000354291 WASH6PQ9NQA3 447 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 ZNF624Q9P2J8 865 aaPredicted RBP15.58■□□□□ 0.08
DDX55-202ENST00000354291 PCSK1NQ9UHG2 260 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 CNOT6Q9ULM6 557 aaKnown RBP15.58■□□□□ 0.08
DDX55-202ENST00000354291 SCINQ9Y6U3 715 aa15.58■□□□□ 0.08
DDX55-202ENST00000354291 IGHV5-51A0A0C4DH38 117 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 DDX3XO00571 662 aaKnown RBP eCLIP15.57■□□□□ 0.084e-17■■■□□ 15.8
DDX55-202ENST00000354291 ATMINO43313 823 aaPredicted RBP15.57■□□□□ 0.08
DDX55-202ENST00000354291 PDHA1P08559 390 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 EBLN1P0CF75 366 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 MYBL1P10243 752 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 ERCC2P18074 760 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 ARL4DP49703 201 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 SEPT7Q16181 437 aaKnown RBP15.57■□□□□ 0.08
DDX55-202ENST00000354291 FIGNQ5HY92 759 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 LYPLAL1Q5VWZ2 237 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 HGSNATQ68CP4 663 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 MED25Q71SY5 747 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 TTC30BQ8N4P2 665 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 NPWQ8N729 165 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 ENDOVQ8N8Q3 282 aaKnown RBP15.57■□□□□ 0.08
DDX55-202ENST00000354291 TMEM102Q8N9M5 508 aaPredicted RBP15.57■□□□□ 0.08
DDX55-202ENST00000354291 GLIS1Q8NBF1 620 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 PIH1D2Q8WWB5 315 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 C5AR2Q9P296 337 aa15.57■□□□□ 0.08
DDX55-202ENST00000354291 BZW2Q9Y6E2 419 aaKnown RBP15.57■□□□□ 0.08
DDX55-202ENST00000354291 PDZK1P1A8MUH7 402 aa15.56■□□□□ 0.08
DDX55-202ENST00000354291 CPNE3O75131 537 aaKnown RBP15.56■□□□□ 0.08
DDX55-202ENST00000354291 KLK3P07288 261 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms