RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 CHRAC1Q9NRG0 131 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 EHD3Q9NZN3 535 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 EGFL7Q9UHF1 273 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 TEKT2Q9UIF3 430 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 KLHL21Q9UJP4 597 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 DAGLAQ9Y4D2 1042 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 LYVE1Q9Y5Y7 322 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 KCNE2Q9Y6J6 123 aa8.07□□□□□ -1.12
ATG4A-201ENST00000343524 A0A087X1B8 175 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 A0A0J9YYE9 177 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ADM5C9JUS6 153 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 G3V2T6 193 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 PLK4O00444 970 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 USP12O75317 370 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ANGPTL1O95841 491 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 NDUFB10O96000 172 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ASS1P00966 412 aaKnown RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 NPPAP01160 153 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 HMGCRP04035 888 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 IFNA16P05015 189 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ERVK-10P10266 1014 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ITGAMP11215 1152 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 SFNP31947 248 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 SESN2P58004 480 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 NCS1P62166 190 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 CD47Q08722 323 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 TNK1Q13470 666 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ZIK1Q3SY52 487 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 PARP15Q460N3 678 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 DPY19L3Q6ZPD9 716 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 Q7L0L9 218 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 STK32CQ86UX6 486 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 MICU2Q8IYU8 434 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 MCPH1Q8NEM0 835 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 FBLIM1Q8WUP2 373 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 SLC7A6Q92536 515 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 GTF2H4Q92759 462 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 RPL3LQ92901 407 aaKnown RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ZNF669Q96BR6 464 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 NSMCE2Q96MF7 247 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ZNF578Q96N58 590 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 MXRA8Q9BRK3 442 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ITPAQ9BY32 194 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 UGT2B28Q9BY64 529 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 RHOJQ9H4E5 214 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 SOX17Q9H6I2 414 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 TLR9Q9NR96 1032 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 CISHQ9NSE2 258 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 FAM49BQ9NUQ9 324 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 FBXL12Q9NXK8 326 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 SLC17A6Q9P2U8 582 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 EIF3KQ9UBQ5 218 aaKnown RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 SNX7Q9UNH6 387 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ERVW-1Q9UQF0 538 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 MRPL11Q9Y3B7 192 aaKnown RBP8.06□□□□□ -1.12
ATG4A-201ENST00000343524 HCN4Q9Y3Q4 1203 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 IPPQ9Y573 584 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 STYXL1Q9Y6J8 313 aa8.06□□□□□ -1.12
ATG4A-201ENST00000343524 ARPC4-TTLL3A0A0A6YYG9 625 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 NR5A2O00482 541 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SLC16A6O15403 523 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 RGS10O43665 173 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CFBP00751 764 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 PSKH1P11801 424 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ATF4P18848 351 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CHRM3P20309 590 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SLC6A2P23975 617 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SLC19A1P41440 591 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CBX5P45973 191 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 GSK3BP49841 420 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CSRP3P50461 194 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CSNK2BP67870 215 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 OLR1P78380 273 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 PRKCEQ02156 737 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 CHRNB3Q05901 458 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 PICALMQ13492 652 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ACAP2Q15057 778 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 MEP1AQ16819 746 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 XKR9Q5GH70 373 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ARMC4Q5T2S8 1044 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ZNF470Q6ECI4 717 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 METTL2BQ6P1Q9 378 aaKnown RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SCARA5Q6ZMJ2 495 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 FAM160B2Q86V87 743 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 PIGZQ86VD9 579 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SLC22A9Q8IVM8 553 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 KIAA0319LQ8IZA0 1049 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 DEPDC4Q8N2C3 294 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 WDTC1Q8N5D0 677 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 TXNDC5Q8NBS9 432 aaKnown RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 FAM83FQ8NEG4 500 aaPredicted RBP8.05□□□□□ -1.12
ATG4A-201ENST00000343524 RDM1Q8NG50 284 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 HTR3CQ8WXA8 447 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 SLC38A4Q969I6 547 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 TMBIM1Q969X1 311 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 ELMO3Q96BJ8 720 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 LRRC58Q96CX6 371 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 DMRTB1Q96MA1 342 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 RNF145Q96MT1 663 aa8.05□□□□□ -1.12
ATG4A-201ENST00000343524 PEBP4Q96S96 227 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms