RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 DCAF4L2Q8NA75 395 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 ANKRD52Q8NB46 1076 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 GOT1L1Q8NHS2 421 aaPredicted RBP10.94□□□□□ -0.66
ATXN3-201ENST00000340660 GIMAP7Q8NHV1 300 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 KLHL6Q8WZ60 621 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 BTN2A3PQ96KV6 586 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 RPRD1AQ96P16 312 aaPredicted RBP10.94□□□□□ -0.66
ATXN3-201ENST00000340660 DMRTA2Q96SC8 542 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 KIAA1586Q9HCI6 787 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 TENM1Q9UKZ4 2725 aa10.94□□□□□ -0.66
ATXN3-201ENST00000340660 WNK1Q9H4A3 2382 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 FAM90A27PA6NNH2 459 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 ADAM10O14672 748 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 XPO1O14980 1071 aaKnown RBP10.93□□□□□ -0.66
ATXN3-201ENST00000340660 PRAMEF2O60811 474 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 RASSF9O75901 435 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 WNT11O96014 354 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 APOEP02649 317 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 NELFEP18615 380 aaKnown RBP10.93□□□□□ -0.66
ATXN3-201ENST00000340660 CD58P19256 250 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 ADMP35318 185 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 POLD2P49005 469 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 CPSF6Q16630 551 aaKnown RBP eCLIP10.93□□□□□ -0.66
ATXN3-201ENST00000340660 MSMPQ1L6U9 139 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 ZNF394Q53GI3 561 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 PLEKHS1Q5SXH7 462 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 PRSS42Q7Z5A4 293 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 SIX6OS1Q8N1H7 587 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 SCML4Q8N228 414 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 KIAA0895Q8NCT3 520 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 CLEC4CQ8WTT0 213 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 CITED4Q96RK1 184 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 BDH2Q9BUT1 245 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 MLPHQ9BV36 600 aaPredicted RBP10.93□□□□□ -0.66
ATXN3-201ENST00000340660 OSBPL1AQ9BXW6 950 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 WDR26Q9H7D7 661 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 SARS2Q9NP81 518 aaKnown RBP10.93□□□□□ -0.66
ATXN3-201ENST00000340660 CNGB3Q9NQW8 809 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 L3MBTL1Q9Y468 752 aa10.93□□□□□ -0.66
ATXN3-201ENST00000340660 LTFP02788 710 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 PYGMP11217 842 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 LCP1P13796 627 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 EGR1P18146 543 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 PEX6Q13608 980 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 PCBP2Q15366 365 aaKnown RBP eCLIP10.92□□□□□ -0.66
ATXN3-201ENST00000340660 INAQ16352 499 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 SGSM1Q2NKQ1 1148 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 C3P1Q6ZMU1 363 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 KRTAP19-1Q8IUB9 90 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 SPPL2CQ8IUH8 684 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 DSELQ8IZU8 1212 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 RYBPQ8N488 228 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-201ENST00000340660 MAGED4Q96JG8 741 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 LCORQ96JN0 433 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-201ENST00000340660 IP6K3Q96PC2 410 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 EPB41L1Q9H4G0 881 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 P4HTMQ9NXG6 502 aa10.92□□□□□ -0.66
ATXN3-201ENST00000340660 KCNU1A8MYU2 1149 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 KRIT1O00522 736 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 TEX33O43247 280 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 SCRG1O75711 98 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 ZMPSTE24O75844 475 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 CD160O95971 181 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 ASS1P00966 412 aaKnown RBP10.91□□□□□ -0.66
ATXN3-201ENST00000340660 NASPP49321 788 aaPredicted RBP10.91□□□□□ -0.66
ATXN3-201ENST00000340660 LIG3P49916 1009 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 DCAF7P61962 342 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 SRSF2Q01130 221 aaKnown RBP10.91□□□□□ -0.66
ATXN3-201ENST00000340660 DEFA6Q01524 100 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 MYLK3Q32MK0 819 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 LCE3BQ5TA77 95 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 PRAMEF17Q5VTA0 474 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 AGAP7PQ5VUJ5 663 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 ARHGAP17Q68EM7 881 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 ZAR1Q86SH2 424 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 CXorf67Q86X51 503 aaPredicted RBP10.91□□□□□ -0.66
ATXN3-201ENST00000340660 AGAP11Q8TF27 550 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 ROBO4Q8WZ75 1007 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 SHC3Q92529 594 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 SH3KBP1Q96B97 665 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 AGAP4Q96P64 663 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 YIPF2Q9BWQ6 316 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 FRMD8Q9BZ67 464 aaPredicted RBP10.91□□□□□ -0.66
ATXN3-201ENST00000340660 APOBEC3GQ9HC16 384 aaKnown RBP10.91□□□□□ -0.66
ATXN3-201ENST00000340660 OLFML3Q9NRN5 406 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 BEX4Q9NWD9 120 aaPredicted RBP10.91□□□□□ -0.66
ATXN3-201ENST00000340660 COQ3Q9NZJ6 369 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 VANGL2Q9ULK5 521 aa10.91□□□□□ -0.66
ATXN3-201ENST00000340660 DOCK10Q96BY6 2186 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 PEX12O00623 359 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 ARHGEF9O43307 516 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 GADD45BO75293 160 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-201ENST00000340660 ALOX12BO75342 701 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 CLDN11O75508 207 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 KLF7O75840 302 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-201ENST00000340660 IGHEP01854 428 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 KLK3P07288 261 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-201ENST00000340660 RHOCP08134 193 aa10.9□□□□□ -0.66
ATXN3-201ENST00000340660 MYCLP1P12525 358 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-201ENST00000340660 CD53P19397 219 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms