RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PARK7Q99497 189 aaKnown RBP14.27□□□□□ -0.13
CPSF7-201ENST00000340437 AARSD1Q9BTE6 412 aaKnown RBP14.27□□□□□ -0.13
CPSF7-201ENST00000340437 SELENONQ9NZV5 590 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 FKBPLQ9UIM3 349 aa14.27□□□□□ -0.13
CPSF7-201ENST00000340437 CEP290O15078 2479 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 NUP214P35658 2090 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-201ENST00000340437 OCM2P0CE71 109 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 OCMP0CE72 109 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-201ENST00000340437 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-201ENST00000340437 RHOQP17081 205 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 DNAJB1P25685 340 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 RPL9P32969 192 aaKnown RBP14.26□□□□□ -0.13
CPSF7-201ENST00000340437 PSMD8P48556 350 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 TIAL1Q01085 375 aaKnown RBP eCLIP14.26□□□□□ -0.135e-6■■■■□ 21
CPSF7-201ENST00000340437 TWF1Q12792 350 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 TAF10Q12962 218 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 CYBRD1Q53TN4 286 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 KANK2Q63ZY3 851 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 MSANTD2Q6P1R3 559 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 ELMSAN1Q6PJG2 1045 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 SPESP1Q6UW49 350 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 ATP6V0D2Q8N8Y2 350 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 SDCCAG3Q96C92 435 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 ZBED2Q9BTP6 218 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 BDH2Q9BUT1 245 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 SYTL2Q9HCH5 934 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 MRGBPQ9NV56 204 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 LEF1Q9UJU2 399 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-201ENST00000340437 UTS2RQ9UKP6 389 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 GIT1Q9Y2X7 761 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 TNS1Q9HBL0 1735 aaKnown RBP14.26□□□□□ -0.13
CPSF7-201ENST00000340437 H0YJX3 145 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 ACOX3O15254 700 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 RASAL1O95294 804 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 CAPN1P07384 714 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 G6PDP11413 515 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 GDF5P43026 501 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 RGRP47804 291 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 ZNF33AQ06730 810 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 MAP2K5Q13163 448 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 MEP1AQ16819 746 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 PERM1Q5SV97 790 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 TAF2Q6P1X5 1199 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 EGFL8Q99944 293 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 TRIM62Q9BVG3 475 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 CCSER2Q9H7U1 834 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 FAM8A1Q9UBU6 413 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 PCDHA9Q9Y5H5 950 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 GPR45Q9Y5Y3 372 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 A0A0G2JMZ2 1700 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 LRRC37A2A6NM11 1700 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 ASPDHA6ND91 283 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 IGLV3-25P01717 112 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 SHMT2P34897 504 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 PBX3P40426 434 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 MTHFRP42898 656 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 SEMG2Q02383 582 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 CHRNB3Q05901 458 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 TNK2Q07912 1038 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 LCN8Q6JVE9 175 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 PSAPL1Q6NUJ1 521 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 PIANPQ8IYJ0 282 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 FAM86B1Q8N7N1 296 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 OR10A6Q8NH74 314 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 UHRF1Q96T88 793 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-201ENST00000340437 BEGAINQ9BUH8 593 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 AFF4Q9UHB7 1163 aaKnown RBP14.26□□□□□ -0.13
CPSF7-201ENST00000340437 ZNHIT2Q9UHR6 403 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 ANGPTL3Q9Y5C1 460 aa14.26□□□□□ -0.13
CPSF7-201ENST00000340437 KIAA0100Q14667 2235 aaKnown RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 MROH6A6NGR9 719 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 XYLBO75191 536 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 BCL10O95999 233 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 GSNP06396 782 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 TCF3P15923 654 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 STC1P52823 247 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 RPS24P62847 133 aaKnown RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 NR1D2Q14995 579 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 MAPRE1Q15691 268 aaKnown RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 GPRIN3Q6ZVF9 776 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 MON1AQ86VX9 555 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 OR6K2Q8NGY2 324 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 PPP1R2P1Q96PQ5 205 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 SEZ6LQ9BYH1 1024 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 HACD3Q9P035 362 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 NT5C1B-RDH14C9J2C7 533 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 CAPNS1P04632 268 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 HSD17B1P14061 328 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 TUSC3Q13454 348 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 AASDHQ4L235 1098 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 LDLRAD1Q5T700 205 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 INTS11Q5TA45 600 aaKnown RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 CCDC81Q6ZN84 652 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 CINPQ9BW66 212 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-201ENST00000340437 ARNT2Q9HBZ2 717 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 PCDH12Q9NPG4 1184 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 HS6ST1O60243 411 aa14.25□□□□□ -0.13
CPSF7-201ENST00000340437 B4GALT3O60512 393 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms