RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ALS2CLQ60I27 953 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 E4F1Q66K89 784 aaPredicted RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 IRGCQ6NXR0 463 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 FAM92BQ6ZTR7 304 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ADGRG6Q86SQ4 1221 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 LRRTM4Q86VH4 590 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 RBM12BQ8IXT5 1001 aaKnown RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 FAM71BQ8TC56 605 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ZDHHC12Q96GR4 267 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 TSGA13Q96PP4 275 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 TIMM29Q9BSF4 260 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ZSCAN5AQ9BUG6 496 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 PDE7BQ9NP56 450 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 EPHA6Q9UF33 1036 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 SLC23A2Q9UGH3 650 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 DNAJC16Q9Y2G8 782 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 CD86P42081 329 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 DCDC1P59894 354 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 TUBB3Q13509 450 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 GPR18Q14330 331 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 UGT8Q16880 541 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 NADK2Q4G0N4 442 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 PDPK2PQ6A1A2 396 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ABRAXAS1Q6UWZ7 409 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 TRAM1L1Q8N609 369 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 THAP4Q8WY91 577 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 GLYATL1Q969I3 302 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 CXorf40BQ96DE9 158 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 BTBD6Q96KE9 485 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 SLC25A23Q9BV35 468 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 NUP85Q9BW27 656 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ADGRE3Q9BY15 652 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 RAB33BQ9H082 229 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ZFYVE1Q9HBF4 777 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 RAD18Q9NS91 495 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 CUEDC1Q9NWM3 386 aaPredicted RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 DTLQ9NZJ0 730 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 NFKBIL1Q9UBC1 381 aaPredicted RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ANAPC7Q9UJX3 599 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 RARRES3Q9UL19 164 aa11.3□□□□□ -0.6
CSMD2-202ENST00000338325 PCDHGA9Q9Y5G4 932 aaKnown RBP11.3□□□□□ -0.6
CSMD2-202ENST00000338325 ESPL1Q14674 2120 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 OR52A4PA6NMU1 304 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 SORBS2O94875 1100 aaKnown RBP11.29□□□□□ -0.6
CSMD2-202ENST00000338325 MMP2P08253 660 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 BRAFP15056 766 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 RPL10P27635 214 aaKnown RBP11.29□□□□□ -0.6
CSMD2-202ENST00000338325 ARSEP51690 589 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 DPYSL3Q14195 570 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 GALNT3Q14435 633 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 CCDC183Q5T5S1 534 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 AGAP9Q5VTM2 703 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 CPZQ66K79 652 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 WASH2PQ6VEQ5 465 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 SYVN1Q86TM6 617 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 SIDT2Q8NBJ9 832 aaKnown RBP11.29□□□□□ -0.6
CSMD2-202ENST00000338325 GPR26Q8NDV2 337 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 UBXN4Q92575 508 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 EID2BQ96D98 161 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 FCRL4Q96PJ5 515 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 RUFY1Q96T51 708 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 GPR87Q9BY21 358 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 SLC40A1Q9NP59 571 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 WASH6PQ9NQA3 447 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 RTN4Q9NQC3 1192 aaKnown RBP11.29□□□□□ -0.6
CSMD2-202ENST00000338325 SEMA5BQ9P283 1151 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 MAP4K5Q9Y4K4 846 aa11.29□□□□□ -0.6
CSMD2-202ENST00000338325 MED13Q9UHV7 2174 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 NOTCH2Q04721 2471 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 IGHV5-51A0A0C4DH38 117 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 VEGFDO43915 354 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 SEMA7AO75326 666 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 RNF224P0DH78 156 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 SKILP12757 684 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 MX2P20592 715 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 IDSP22304 550 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 PTPN4P29074 926 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 SSR1P43307 286 aaKnown RBP11.28□□□□□ -0.6
CSMD2-202ENST00000338325 DRG2P55039 364 aaKnown RBP11.28□□□□□ -0.6
CSMD2-202ENST00000338325 PPP1CAP62136 330 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 RPS18P62269 152 aaKnown RBP11.28□□□□□ -0.6
CSMD2-202ENST00000338325 CHAF1BQ13112 559 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 HADHQ16836 314 aaKnown RBP11.28□□□□□ -0.6
CSMD2-202ENST00000338325 PAPD7Q5XG87 772 aaKnown RBP11.28□□□□□ -0.6
CSMD2-202ENST00000338325 PWWP2BQ6NUJ5 590 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 LRRN4Q8WUT4 740 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 HDAC11Q96DB2 347 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 SLC41A2Q96JW4 573 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 ZNF670Q9BS34 389 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 MLXIPLQ9NP71 852 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 ACSS2Q9NR19 701 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 LMBRD1Q9NUN5 540 aa11.28□□□□□ -0.6
CSMD2-202ENST00000338325 RP1L1Q8IWN7 2480 aaPredicted RBP11.27□□□□□ -0.61
CSMD2-202ENST00000338325 ARGFXA6NJG6 315 aa11.27□□□□□ -0.61
CSMD2-202ENST00000338325 MTX2O75431 263 aa11.27□□□□□ -0.61
CSMD2-202ENST00000338325 SLC4A1P02730 911 aa11.27□□□□□ -0.61
CSMD2-202ENST00000338325 FOLR1P15328 257 aa11.27□□□□□ -0.61
CSMD2-202ENST00000338325 VCLP18206 1134 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms