RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 FAM124BQ9H5Z6 455 aaPredicted RBP20.88■□□□□ 0.93
RNF40-201ENST00000324685 RAI2Q9Y5P3 530 aa20.88■□□□□ 0.93
RNF40-201ENST00000324685 SMIM35A0A1B0GVV1 85 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 ADAMDEC1O15204 470 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 CHP2O43745 196 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 CILPO75339 1184 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 PTX3P26022 381 aaPredicted RBP20.87■□□□□ 0.93
RNF40-201ENST00000324685 ALDH3A2P51648 485 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 C2orf80Q0P641 193 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 ECHDC2Q86YB7 292 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 IQGAP1P46940 1657 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 ASLP04424 464 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 TFPIP10646 304 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 AQP1P29972 269 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 MON1BQ7L1V2 547 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 NKD2Q969F2 451 aaPredicted RBP20.87■□□□□ 0.93
RNF40-201ENST00000324685 C5orf34Q96MH7 638 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 ALG2Q9H553 416 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 ZNF304Q9HCX3 659 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 EQTNQ9NQ60 294 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 PEX16Q9Y5Y5 336 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 PXDNQ92626 1479 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 DIP2CQ9Y2E4 1556 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 FAM155BO75949 473 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 CLCQ05315 142 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 LCP2Q13094 533 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 TUSC3Q13454 348 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 VPS26BQ4G0F5 336 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 FAM91A1Q658Y4 838 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 GPR65Q8IYL9 337 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 IL31RAQ8NI17 732 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 PPTC7Q8NI37 304 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 CPT1BQ92523 772 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 RFKQ969G6 155 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 SLC38A4Q969I6 547 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 TTPALQ9BTX7 342 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 ACAT2Q9BWD1 397 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 BRINP2Q9C0B6 783 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 GMIPQ9P107 970 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 HMGXB4Q9UGU5 601 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 E9PAM4 449 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 NEDD8-MDP1E9PL57 170 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 PGRP06401 933 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 MSX2P35548 267 aaPredicted RBP20.87■□□□□ 0.93
RNF40-201ENST00000324685 GPR158Q5T848 1215 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 PNPT1Q8TCS8 783 aaKnown RBP20.87■□□□□ 0.93
RNF40-201ENST00000324685 TMEM109Q9BVC6 243 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 LGALS13Q9UHV8 139 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 TCAF1Q9Y4C2 921 aa20.87■□□□□ 0.93
RNF40-201ENST00000324685 SCN1BQ07699 218 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 PLA2G4EQ3MJ16 856 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 PRAMEF19Q5SWL8 479 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 UBR7Q8N806 425 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 AGAP2Q99490 1192 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 IPPKQ9H8X2 491 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 SP140LQ9H930 580 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 NKIRAS2Q9NYR9 191 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 LAMP2P13473 410 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 ZNF155Q12901 538 aaPredicted RBP20.86■□□□□ 0.93
RNF40-201ENST00000324685 GTF2H2Q13888 395 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 RNASE12Q5GAN4 147 aaKnown RBP20.86■□□□□ 0.93
RNF40-201ENST00000324685 IL23RQ5VWK5 629 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 GTF2H2CQ6P1K8 395 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 NAT14Q8WUY8 206 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 MED28Q9H204 178 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 ABCB9Q9NP78 766 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 RSL1D1O76021 490 aaKnown RBP20.86■□□□□ 0.93
RNF40-201ENST00000324685 CBX3Q13185 183 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 MED27Q6P2C8 311 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 C11orf65Q8NCR3 313 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 PIGXQ8TBF5 258 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 DNASE1L2Q92874 299 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 GPR21Q99679 349 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 CALML5Q9NZT1 146 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 BCL9O00512 1426 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 PRMT3O60678 531 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 ARF4P18085 180 aaPredicted RBP20.86■□□□□ 0.93
RNF40-201ENST00000324685 GABRR2P28476 465 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 CDH4P55283 916 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 P2RY8Q86VZ1 359 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 PLD5Q8N7P1 536 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 CFAP97Q9P2B7 532 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.86■□□□□ 0.93
RNF40-201ENST00000324685 CCNB2O95067 398 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 SNX20Q7Z614 316 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 SNX33Q8WV41 574 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 XAGE5Q8WWM1 108 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 PCDHGC3Q9UN70 934 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 GRIP1Q9Y3R0 1128 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 DGKBQ9Y6T7 804 aa20.86■□□□□ 0.93
RNF40-201ENST00000324685 A8MUI8 341 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 RBMXL2O75526 392 aaKnown RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 CCR10P46092 362 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 BRCC3P46736 316 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 SF1Q15637 639 aaKnown RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 ECM1Q16610 540 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 SIX5Q8N196 739 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 CFAP52Q8N1V2 620 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 NETO2Q8NC67 525 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 PIK3R3Q92569 461 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms