RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CNOT6Q9ULM6 557 aaKnown RBP16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 RLN2P04090 185 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 TPSB2P20231 275 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 MARCKSL1P49006 195 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 TPSAB1Q15661 275 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 ZC3H12AQ5D1E8 599 aaKnown RBP16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 C11orf65Q8NCR3 313 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 LGMNQ99538 433 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 ULBP1Q9BZM6 244 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 TMEM27Q9HBJ8 222 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 EQTNQ9NQ60 294 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 DHX15O43143 795 aaKnown RBP16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 CCNB2O95067 398 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 ACSL1P33121 698 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 RPL6Q02878 288 aaKnown RBP16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 ACER1Q8TDN7 264 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 MTRRQ9UBK8 725 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 CARTPTQ16568 116 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 C4orf46Q504U0 113 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 RALGPS2Q86X27 583 aaPredicted RBP16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 LGR4Q9BXB1 951 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 UNC93B1Q9H1C4 597 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 XKR8Q9H6D3 395 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 ALG5Q9Y673 324 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 CNTNAP4Q9C0A0 1308 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 LTN1O94822 1766 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 PRAMEF1O95521 474 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 SLC2A2P11168 524 aaPredicted RBP16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 STOMP27105 288 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 TPTEP56180 551 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 C17orf64Q86WR6 236 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 ELMO3Q96BJ8 720 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 HMGXB4Q9UGU5 601 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 M0R036 132 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 MC4RP32245 332 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 SEMA5AQ13591 1074 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 PRAMEF18Q5VWM3 479 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 TBC1D17Q9HA65 648 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 C1QTNF3-AMACRE9PGA6 284 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 TGFB2P61812 414 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 DENND1CQ8IV53 801 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 DENND6BQ8NEG7 585 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 RC3H2Q9HBD1 1191 aaKnown RBP16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 ZNF69Q9UC07 566 aa16.74■□□□□ 0.27
SMCHD1-201ENST00000320876 SCN2BO60939 215 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 ELFN1P0C7U0 828 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 MPSTP25325 297 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 RIPPLY1Q0D2K3 151 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 RASGEF1BQ0VAM2 473 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 IDNKQ5T6J7 187 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 ERI1Q8IV48 349 aaKnown RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 ANKRD52Q8NB46 1076 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 AIF1LQ9BQI0 150 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 CNPPD1Q9BV87 410 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 TMPRSS4Q9NRS4 437 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 URB1O60287 2271 aaKnown RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 A0A075B6Q4 140 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 SCELO95171 688 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 YES1P07947 543 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 PAX3P23760 479 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 KLF10Q13118 480 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 MRPL45Q9BRJ2 306 aaKnown RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 KAT8Q9H7Z6 458 aaKnown RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 ZNF99A8MXY4 864 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 CLPXO76031 633 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 RGS8P57771 180 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 RBM48Q5RL73 367 aaKnown RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 OR52J3Q8NH60 311 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 SSU72Q9NP77 194 aaKnown RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 GPN3Q9UHW5 284 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 CYB5AP00167 134 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 GNALP38405 381 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 ADGRE1Q14246 886 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 SLC26A9Q7LBE3 791 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 BEND7Q8N7W2 519 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 CCR10P46092 362 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 DLG2Q15700 870 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 PRAMEF17Q5VTA0 474 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 SPERTQ8NA61 448 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 OR10H4Q8NGA5 316 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 SENP8Q96LD8 212 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 FBXO5Q9UKT4 447 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 MAP4K5Q9Y4K4 846 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 PCDHB1Q9Y5F3 818 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 ASTN1O14525 1302 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 NOL4O94818 638 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 CELF2O95319 508 aaKnown RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 SSR2P43308 183 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 CXCR3P49682 368 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 CHMP1AQ9HD42 196 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 PTPRUQ92729 1446 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 M0QX08 132 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 HCN1O60741 890 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 SLC25A14O95258 325 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 SDR16C5Q8N3Y7 309 aa16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 VANGL1Q8TAA9 524 aaPredicted RBP16.73■□□□□ 0.27
SMCHD1-201ENST00000320876 ACAT2Q9BWD1 397 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms