RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 DCSTAMPQ9H295 470 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 DMGDHQ9UI17 866 aaKnown RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 MRTO4Q9UKD2 239 aaKnown RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 MINPP1Q9UNW1 487 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 AKT3Q9Y243 479 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 FKBP7Q9Y680 259 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PRG4Q92954 1404 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CSF1RP07333 972 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 GKN3PP0CG01 181 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 AIF1P55008 147 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PTH1RQ03431 593 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SNTA1Q13424 505 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 MOGSQ13724 837 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 RNF220Q5VTB9 566 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ABLIM2Q6H8Q1 611 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SCUBE3Q8IX30 993 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 DSELQ8IZU8 1212 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 FBXO36Q8NEA4 188 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 FAM46DQ8NEK8 389 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 NECAB3Q96P71 396 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 INTS7Q9NVH2 962 aaKnown RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 GPRC5DQ9NZD1 345 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 AGO2Q9UKV8 859 aaKnown RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 TICRRQ7Z2Z1 1910 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 WNT7AO00755 349 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 RFPL2O75678 378 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SLC22A3O75751 556 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CASP1P29466 404 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 RGS8P57771 180 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 POLA2Q14181 598 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 GALEQ14376 348 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PRKD1Q15139 912 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 BTBD16Q32M84 506 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 IQCHQ86VS3 1027 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 LRRC71Q8N4P6 559 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 C1GALT1C1Q96EU7 318 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PNMA5Q96PV4 448 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PSD2Q9BQI7 771 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SH2D3AQ9BRG2 576 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SPATA9Q9BWV2 254 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ATP13A3Q9H7F0 1226 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ACTR8Q9H981 624 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 STXBP5LQ9Y2K9 1186 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 EXPH5Q8NEV8 1989 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ZNF646O15015 1829 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ABCB7O75027 752 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CPNE3O75131 537 aaKnown RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 OTCP00480 354 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 TYRP14679 529 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 RAB3BP20337 219 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ELK3P41970 407 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 DPP6P42658 865 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 IL2P60568 153 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PTPROQ16827 1216 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 FAM43BQ6ZT52 329 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 MFSD6LQ8IWD5 586 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ATP6V0D2Q8N8Y2 350 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 IP6K1Q92551 441 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 NELL1Q92832 810 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 BCL2L14Q9BZR8 327 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CYB5R1Q9UHQ9 305 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 USP20Q9Y2K6 914 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PCDHB6Q9Y5E3 794 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 NRXN1Q9ULB1 1477 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ARFGEF2Q9Y6D5 1785 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ACOX3O15254 700 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 FGF10O15520 208 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 TBX1O43435 398 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PLA2G6O60733 806 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 HCN1O60741 890 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CYBBP04839 570 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 BMP3P12645 472 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SLC1A3P43003 542 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CPA2P48052 419 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 PRAMEF17Q5VTA0 474 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 TMEM199Q8N511 208 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CORO1BQ9BR76 489 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ALG2Q9H553 416 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SPTLC1O15269 473 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 TLL1O43897 1013 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 STXBP1P61764 594 aaKnown RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 LIPEQ05469 1076 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 NCOA4Q13772 614 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CORO6Q6QEF8 472 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ARSKQ6UWY0 536 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SLC30A10Q6XR72 485 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CENPSQ8N2Z9 138 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 LARGE2Q8N3Y3 721 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 C12orf45Q8N5I9 185 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-201ENST00000297405 SMARCD2Q92925 531 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 FAIM2Q9BWQ8 316 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ZYG11BQ9C0D3 744 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 KCNK13Q9HB14 408 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ABCB9Q9NP78 766 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 IFT46Q9NQC8 304 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 ARL5AQ9Y689 179 aa4.81□□□□□ -1.64
CSMD3-201ENST00000297405 CCNT2O60583 730 aaKnown RBP4.8□□□□□ -1.64
CSMD3-201ENST00000297405 EDF1O60869 148 aaKnown RBP4.8□□□□□ -1.64
CSMD3-201ENST00000297405 ANXA8P13928 327 aa4.8□□□□□ -1.64
CSMD3-201ENST00000297405 RGS19P49795 217 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms