RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 WNT6Q9Y6F9 365 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ATG2BQ96BY7 2078 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 FAM92AA1XBS5 289 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 SYCE1LA8MT33 242 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 NPHS1O60500 1241 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 PRLP01236 227 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 HSPA8P11142 646 aaKnown RBP9.21□□□□□ -0.93
PRDM9-201ENST00000296682 MTHFD1P11586 935 aaKnown RBP9.21□□□□□ -0.93
PRDM9-201ENST00000296682 CTNNB1P35222 781 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 RGS4P49798 205 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ZXDBP98169 803 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 MAPRE2Q15555 327 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 SLC14A2Q15849 920 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 PABPC1LQ4VXU2 614 aaKnown RBP9.21□□□□□ -0.93
PRDM9-201ENST00000296682 RABL3Q5HYI8 236 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 OTUD3Q5T2D3 398 aaPredicted RBP9.21□□□□□ -0.93
PRDM9-201ENST00000296682 SETD3Q86TU7 594 aaPredicted RBP9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ITIH5Q86UX2 942 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ADGRG2Q8IZP9 1017 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 C12orf76Q8N812 135 aaPredicted RBP9.21□□□□□ -0.93
PRDM9-201ENST00000296682 LRTOMTQ8WZ04 291 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 SPATA17Q96L03 361 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ZNF385DQ9H6B1 395 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 CAAP1Q9H8G2 361 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ARNT2Q9HBZ2 717 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 ASAH2Q9NR71 780 aa9.21□□□□□ -0.93
PRDM9-201ENST00000296682 EFEMP2O95967 443 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 GSNP06396 782 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 ITPKAP23677 461 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 DPP6P42658 865 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 RPL38P63173 70 aaKnown RBP9.21□□□□□ -0.94
PRDM9-201ENST00000296682 LMAN2Q12907 356 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 ABRQ12979 859 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 GAREM2Q75VX8 874 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 ADGRG6Q86SQ4 1221 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 PQLC1Q8N2U9 271 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 BEND7Q8N7W2 519 aaPredicted RBP9.21□□□□□ -0.94
PRDM9-201ENST00000296682 LMNTD1Q8N9Z9 388 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 DCUN1D1Q96GG9 259 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 TUBGCP5Q96RT8 1024 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 SLC25A23Q9BV35 468 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 ELAC1Q9H777 363 aaKnown RBP9.21□□□□□ -0.94
PRDM9-201ENST00000296682 IPPKQ9H8X2 491 aa9.21□□□□□ -0.94
PRDM9-201ENST00000296682 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.21□□□□□ -0.94
PRDM9-201ENST00000296682 IGLV3-10A0A075B6K4 115 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 TRAV19A0A0A6YYK7 116 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 MROH6A6NGR9 719 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SCAMP1O15126 338 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SEC22BO75396 215 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SERPINA4P29622 427 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 HNF1BP35680 557 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 NNMTP40261 264 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 NEK2P51955 445 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 UFM1P61960 85 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 FOLH1Q04609 750 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 AAK1Q2M2I8 961 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 GPRIN3Q6ZVF9 776 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 OR10Q1Q8NGQ4 319 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 FAR2Q96K12 515 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 ZFYVE19Q96K21 471 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 TSC22D3Q99576 134 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 PKP2Q99959 881 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 STK39Q9UEW8 545 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 MOSPD1Q9UJG1 213 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 GLYATL1P3A0A0U1RQE8 302 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 PITPNM1O00562 1244 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 GSTA4O15217 222 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 IGSF6O95976 241 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 CHRM1P11229 460 aaPredicted RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 MTTPP55157 894 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 TPD52P55327 224 aaPredicted RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SMARCB1Q12824 385 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 ATP6AP1LQ52LC2 224 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 CXorf57Q6NSI4 855 aaKnown RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 DHFR2Q86XF0 187 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 NKAPQ8N5F7 415 aaKnown RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 OR56A4Q8NGH8 313 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 PLD4Q96BZ4 506 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 MED8Q96G25 268 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 UBXN10Q96LJ8 280 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 KLHL32Q96NJ5 620 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 PRPF18Q99633 342 aaKnown RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 MGME1Q9BQP7 344 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 ATP13A3Q9H7F0 1226 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 MYOFQ9NZM1 2061 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 AP4S1Q9Y587 144 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 DENND4CQ5VZ89 1909 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 CCDC154A6NI56 674 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 PDLIM1O00151 329 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SLC22A2O15244 555 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SNUPNO95149 360 aaKnown RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 HIST1H2AGP0C0S8 130 aaPredicted RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 HIST1H2ADP20671 130 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 ITGB8P26012 769 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 PRDX6P30041 224 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 HTR6P50406 440 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 MRPS35P82673 323 aaKnown RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 LCP2Q13094 533 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SQLEQ14534 574 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 CYP51A1Q16850 503 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms