RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 RADILQ96JH8 1075 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 FTHL17Q9BXU8 183 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 NIPAL2Q9H841 368 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 DBNDD1Q9H9R9 158 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 ANAPC2Q9UJX6 822 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 AGO1Q9UL18 857 aaKnown RBP9.15□□□□□ -0.95
PDGFC-201ENST00000274071 KLHL20Q9Y2M5 609 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 PCDHGB2Q9Y5G2 931 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 MAGED1Q9Y5V3 778 aaPredicted RBP9.15□□□□□ -0.95
PDGFC-201ENST00000274071 SNED1Q8TER0 1413 aa9.15□□□□□ -0.95
PDGFC-201ENST00000274071 COL11A2P13942 1736 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 TISP43B9A030 160 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 EEF2KO00418 725 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 CHADO15335 359 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 TRIM13O60858 407 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 UGT2B17O75795 530 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 ASS1P00966 412 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 DNTTP04053 509 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 FCGR1AP12314 374 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 GAP43P17677 238 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 PSMB9P28065 219 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 RAP1GAPP47736 663 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 UGT2B15P54855 530 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 SPIRE1Q08AE8 756 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF252P-AS1Q0IIN9 211 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 CLCA4Q14CN2 919 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 PDK2Q15119 407 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF124Q15973 351 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 CYP51A1Q16850 503 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 ARL13AQ5H913 290 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 LIN9Q5TKA1 542 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 LRRC38Q5VT99 294 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 PAMR1Q6UXH9 720 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 RBM23Q86U06 439 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 PLD6Q8N2A8 252 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 PHF21AQ96BD5 680 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 AHCYL2Q96HN2 611 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 SPATA9Q9BWV2 254 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 SPNS1Q9H2V7 528 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 XPNPEP3Q9NQH7 507 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 DDX4Q9NQI0 724 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 RAB6BQ9NRW1 208 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF219Q9P2Y4 722 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 AGTPBP1Q9UPW5 1226 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 A0A0B4J293 547 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 MRASO14807 208 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 DSCR3O14972 297 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 XPNPEP2O43895 674 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 CNTN5O94779 1100 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 PGLSO95336 258 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 LDLRP01130 860 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 TCF3P15923 654 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 GBX2P52951 348 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 AP1S2P56377 157 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 IQCCQ4KMZ1 466 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 BRDTQ58F21 947 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 GLYATQ6IB77 296 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 LRFN4Q6PJG9 635 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 TEX261Q6UWH6 196 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 UNC5DQ6UXZ4 953 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 USP50Q70EL3 339 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 GPALPP1Q8IXQ4 340 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 MPP5Q8N3R9 675 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF366Q8N895 744 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 TXNDC5Q8NBS9 432 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 TEX47Q8TBZ9 253 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 SMG7Q92540 1137 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 YIPF5Q969M3 257 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 RNF31Q96EP0 1072 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 MFSD3Q96ES6 412 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 LRCH3Q96II8 777 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 NXF2Q9GZY0 626 aaKnown RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 LHX5Q9H2C1 402 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 RANBP3Q9H6Z4 567 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 LRRC4Q9HBW1 653 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 BFARQ9NZS9 450 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 ELF5Q9UKW6 265 aaPredicted RBP9.14□□□□□ -0.95
PDGFC-201ENST00000274071 FZD1Q9UP38 647 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 KCNH4Q9UQ05 1017 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 TLR6Q9Y2C9 796 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 U3KQ87 197 aa9.14□□□□□ -0.95
PDGFC-201ENST00000274071 DICER1Q9UPY3 1922 aaKnown RBP9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SMLR1H3BR10 107 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 NME4O00746 187 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 MUSKO15146 869 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 LRIG2O94898 1065 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ALPLP05186 524 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 THRBP10828 461 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 SLC2A3P11169 496 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 TYK2P29597 1187 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 HNF4AP41235 474 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 ALDH3A2P51648 485 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 DGKQP52824 942 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PER3P56645 1201 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 PCDH1Q08174 1060 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 DSC1Q08554 894 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 GRIK2Q13002 908 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 POU4F3Q15319 338 aa9.13□□□□□ -0.95
PDGFC-201ENST00000274071 AGKQ53H12 422 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms