RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CCT3P49368 545 aaKnown RBP16.15■□□□□ 0.18
GPC1-201ENST00000264039 SMN1Q16637 294 aaKnown RBP16.15■□□□□ 0.18
GPC1-201ENST00000264039 USP41Q3LFD5 358 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 PAGE3Q5JUK9 113 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 RAB43Q86YS6 212 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 EFHBQ8N7U6 833 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 PIK3C3Q8NEB9 887 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 ENKURQ8TC29 256 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 C18orf25Q96B23 403 aaPredicted RBP16.15■□□□□ 0.18
GPC1-201ENST00000264039 TMEM134Q9H6X4 195 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 SP140LQ9H930 580 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 MTMR10Q9NXD2 777 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 OGDHLQ9ULD0 1010 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 BBIP1A8MTZ0 92 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 C12orf71A8MTZ7 269 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 SLC1A7O00341 560 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 PGK2P07205 417 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 AQP1P29972 269 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 HTR2BP41595 481 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 PPP5CP53041 499 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 PAN2Q504Q3 1202 aaKnown RBP16.15■□□□□ 0.18
GPC1-201ENST00000264039 CEP78Q5JTW2 689 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 CATSPEREQ5SY80 951 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 GPR153Q6NV75 609 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 OR7G1Q8NGA0 311 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 LPAR1Q92633 364 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 MINDY3Q9H8M7 445 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 ZBTB20Q9HC78 741 aaPredicted RBP16.15■□□□□ 0.18
GPC1-201ENST00000264039 FAM118AQ9NWS6 357 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 CCDC162PA2VCL2 907 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 ARVCFO00192 962 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 UBA1P22314 1058 aaKnown RBP16.15■□□□□ 0.18
GPC1-201ENST00000264039 MATKP42679 507 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 RBM48Q5RL73 367 aaKnown RBP16.15■□□□□ 0.18
GPC1-201ENST00000264039 ZNF544Q6NX49 715 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 DCP1BQ8IZD4 617 aaKnown RBP16.15■□□□□ 0.18
GPC1-201ENST00000264039 COPS5Q92905 334 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 FAM167AQ96KS9 214 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 OSBPL2Q9H1P3 480 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 SP110Q9HB58 689 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 GOLGA2P5Q9HBQ8 144 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 TIGARQ9NQ88 270 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 GMIPQ9P107 970 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 SNX6Q9UNH7 406 aa16.15■□□□□ 0.18
GPC1-201ENST00000264039 M0QX08 132 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 ICMTO60725 284 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 ALDOCP09972 364 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 GSTM2P28161 218 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 TOP3AQ13472 1001 aaPredicted RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 MAPKAPK3Q16644 382 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 ADPRMQ3LIE5 342 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 MINDY2Q8NBR6 621 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 C7orf57Q8NEG2 295 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 PHOX2BQ99453 314 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 VRTNQ9H8Y1 702 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 SLCO3A1Q9UIG8 710 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 ENPP3O14638 875 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 TMCC2O75069 709 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 LEPRP48357 1165 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 HNRNPFP52597 415 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 EMX1Q04741 257 aaPredicted RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 PDZK1Q5T2W1 519 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 STEAP3Q658P3 488 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 FAM45BPQ6NSW5 357 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 GADL1Q6ZQY3 521 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 TMEM135Q86UB9 458 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 FAM45AQ8TCE6 357 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 WNT8BQ93098 351 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 ZUFSPQ96AP4 578 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 REXO5Q96IC2 774 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 KLHL5Q96PQ7 755 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 RBM4BQ9BQ04 359 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 RBM4Q9BWF3 364 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 PRMT7Q9NVM4 692 aaPredicted RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 SAMHD1Q9Y3Z3 626 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 POLR3HQ9Y535 204 aaPredicted RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 DNAJC15Q9Y5T4 150 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 B4GALT4O60513 344 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 RGS20O76081 388 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 C1RP00736 705 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 RAP2AP10114 183 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 POLR2EP19388 210 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 ENDOUP21128 410 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 RPL38P63173 70 aaKnown RBP16.14■□□□□ 0.17
GPC1-201ENST00000264039 IFITM3Q01628 133 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 ENPP6Q6UWR7 440 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 RTP4Q96DX8 246 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 TNIP3Q96KP6 325 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 C12orf4Q9NQ89 552 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 ENPP5Q9UJA9 477 aa16.14■□□□□ 0.17
GPC1-201ENST00000264039 EVPLLA8MZ36 301 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 HMBSP08397 361 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 MSH3P20585 1137 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 SLC15A1P46059 708 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 TYSND1Q2T9J0 566 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 OR8H1Q8NGG4 311 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 Q96MT0 163 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 SPON2Q9BUD6 331 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 YTHDF1Q9BYJ9 559 aaKnown RBP16.13■□□□□ 0.17
GPC1-201ENST00000264039 MALT1Q9UDY8 824 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms