RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TRNAU1APQ9NX07 287 aaKnown RBP16.59■□□□□ 0.25
SDCBP-201ENST00000260130 FKBPLQ9UIM3 349 aa16.59■□□□□ 0.25
SDCBP-201ENST00000260130 APPL1Q9UKG1 709 aa16.59■□□□□ 0.25
SDCBP-201ENST00000260130 TMPRSS11EQ9UL52 423 aa16.59■□□□□ 0.25
SDCBP-201ENST00000260130 DOLKQ9UPQ8 538 aa16.59■□□□□ 0.25
SDCBP-201ENST00000260130 GAPDHSO14556 408 aaPredicted RBP16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A9O60656 530 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 ECEL1O95672 775 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 NUDT17P0C025 328 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A6P19224 532 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A1P22309 533 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A4P22310 534 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A3P35503 534 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A5P35504 534 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 ITGA9Q13797 1035 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 SEPT6Q14141 434 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 PROX2Q3B8N5 592 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 CERCAMQ5T4B2 595 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 LVRNQ6Q4G3 990 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 ZNF398Q8TD17 642 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 TLCD1Q96CP7 247 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A7Q9HAW7 530 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A10Q9HAW8 530 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 UGT1A8Q9HAW9 530 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 ZDHHC18Q9NUE0 388 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 PCYOX1Q9UHG3 505 aa16.58■□□□□ 0.25
SDCBP-201ENST00000260130 BPTFQ12830 3046 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 TPSB2P20231 275 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 PMS2P54278 862 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 TMPRSS15P98073 1019 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 ACTN3Q08043 901 aaPredicted RBP16.58■□□□□ 0.24
SDCBP-201ENST00000260130 TPSAB1Q15661 275 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 PYCR3Q53H96 274 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 N4BP2L1Q5TBK1 243 aaPredicted RBP16.58■□□□□ 0.24
SDCBP-201ENST00000260130 ZCCHC8Q6NZY4 707 aaKnown RBP16.58■□□□□ 0.24
SDCBP-201ENST00000260130 TAF8Q7Z7C8 310 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 JAMLQ86YT9 394 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 FAM181AQ8N9Y4 354 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 STYXQ8WUJ0 223 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 SCG3Q8WXD2 468 aaKnown RBP16.58■□□□□ 0.24
SDCBP-201ENST00000260130 APOLD1Q96LR9 279 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 RMI1Q9H9A7 625 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 ATXN10Q9UBB4 475 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 GPSM3Q9Y4H4 160 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 PCNX2A6NKB5 2137 aa16.58■□□□□ 0.24
SDCBP-201ENST00000260130 TDRD6O60522 2096 aaKnown RBP16.57■□□□□ 0.24
SDCBP-201ENST00000260130 MROH6A6NGR9 719 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 AP3B1O00203 1094 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 DNAJC6O75061 913 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 SRP72O76094 671 aaKnown RBP16.57■□□□□ 0.24
SDCBP-201ENST00000260130 PRAMEF1O95521 474 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 ADCY8P40145 1251 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 XIAPP98170 497 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 LAMB3Q13751 1172 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 PPP1R7Q15435 360 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 CCDC38Q502W7 563 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 ZNF648Q5T619 568 aaPredicted RBP16.57■□□□□ 0.24
SDCBP-201ENST00000260130 GALNT13Q8IUC8 556 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 CCL4L1Q8NHW4 92 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 GDAP1Q8TB36 358 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 GPBAR1Q8TDU6 330 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 SLCO2A1Q92959 643 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 DNAJC1Q96KC8 554 aaKnown RBP16.57■□□□□ 0.24
SDCBP-201ENST00000260130 OR2AG1Q9H205 316 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 NLE1Q9NVX2 485 aaPredicted RBP16.57■□□□□ 0.24
SDCBP-201ENST00000260130 ZNHIT2Q9UHR6 403 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 SPEGQ15772 3267 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 HEATR9A2RTY3 570 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 CKMT2P17540 419 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 ADRA1DP25100 572 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 MAGEA6P43360 314 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 ILF3Q12906 894 aaKnown RBP eCLIP16.57■□□□□ 0.24
SDCBP-201ENST00000260130 DNAJC3Q13217 504 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 KCNJ11Q14654 390 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 C6orf132Q5T0Z8 1188 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 SWT1Q5T5J6 900 aaKnown RBP16.57■□□□□ 0.24
SDCBP-201ENST00000260130 ADGRG6Q86SQ4 1221 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 CACNA2D3Q8IZS8 1091 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 RUNDC3BQ96NL0 473 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 OR2M4Q96R27 311 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 RANBP9Q96S59 729 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 ASB8Q9H765 288 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 SMOXQ9NWM0 555 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 TOR4AQ9NXH8 423 aa16.57■□□□□ 0.24
SDCBP-201ENST00000260130 APOBEC2Q9Y235 224 aaKnown RBP16.57■□□□□ 0.24
SDCBP-201ENST00000260130 TCRBV7S3A2A0A539 114 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 GPR89AB7ZAQ6 455 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 GPR39O43194 453 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 VEGFDO43915 354 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 NUAK1O60285 661 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 FTH1P19P0C7X4 201 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 GPR89BP0CG08 455 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 ZNF8P17098 575 aaPredicted RBP16.56■□□□□ 0.24
SDCBP-201ENST00000260130 SARNPP82979 210 aaKnown RBP16.56■□□□□ 0.24
SDCBP-201ENST00000260130 CTBSQ01459 385 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 PEX6Q13608 980 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 SLCO6A1Q86UG4 719 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 CPT1BQ92523 772 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 CDKN2AIPNLQ96HQ2 116 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 BOCQ9BWV1 1114 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms