RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Scrg1O88745 98 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Cbx3P23198 183 aaKnown RBP11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Mfsd14aP70187 490 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Ikzf2P81183 526 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 ChatQ03059 641 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Muc3aQ3U5A2 218 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Prickle1Q3U5C7 832 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Rab26Q504M8 260 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Ift52Q62559 426 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Trpv1Q704Y3 839 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Mrps35Q8BJZ4 320 aaKnown RBP11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Cnot6Q8K3P5 557 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Olfr1361Q8VFH0 317 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Tmbim4Q9DA39 238 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Ampd2Q9DBT5 798 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Drg2Q9QXB9 364 aaKnown RBP11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 MaddQ80U28 1577 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Gm16494E9Q2Z4 87 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Glyatl3E9Q5L8 290 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Coro1aO89053 461 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Cyp17a1P27786 507 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 EpxP49290 716 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 AcadlP51174 430 aaKnown RBP11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Acvrl1Q61288 502 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Aste1Q8BIR2 672 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Psd4Q8BLR5 1005 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Smoc1Q8BLY1 463 aaKnown RBP11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Pcdha8Q91Y12 946 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Mtfr1Q99MB2 328 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Gkn2Q9CQS6 184 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Gtf2h2Q9JIB4 396 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Sppl2aQ9JJF9 523 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 DguokQ9QX60 277 aa11.72□□□□□ -0.53
Scn8a-208ENSMUST00000200963 4930579F01RikE9Q3L6 325 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Calhm3J3QMI4 347 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 NsmafO35242 920 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Q32M26 199 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Klhl42Q8BFQ9 493 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Znf436Q8BPP0 452 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Lrrc4cQ8C031 640 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Mrps2Q924T2 291 aaKnown RBP11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Slc12a9Q99MR3 914 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Hddc3Q9D114 179 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Tatdn2B7ZNL9 783 aaKnown RBP11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Sypl2O89104 264 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Irf3P70671 419 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Nxpe4Q52KP5 543 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Etaa1Q5SVT3 877 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Trpm4Q7TN37 1213 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Casp9Q8C3Q9 454 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Agbl2Q8CDK2 862 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Taf10Q8K0H5 218 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Camkk1Q8VBY2 505 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Col26a1Q91VF6 440 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Atg13Q91YI1 516 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Tsga13Q9DA17 273 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Khdrbs2Q9WU01 349 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Cdc6O89033 562 aaKnown RBP11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Hoxa2P31245 372 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 E2f2P56931 443 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Ap5b1Q3TAP4 876 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Dnaaf3Q3UYV8 586 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Adam6bQ6IMH7 756 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Dalrd3Q6PJN8 538 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Tmc6Q7TN60 810 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Klk6Q91Y82 253 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Fam96aQ9DCL2 160 aa11.71□□□□□ -0.53
Scn8a-208ENSMUST00000200963 Vmn2r120E9PX34 856 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Ccnd3P30282 292 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Btg3P50615 252 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Dcst1Q059Y8 732 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 CluQ06890 448 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Gsk3aQ2NL51 490 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 E2f5Q61502 335 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Kcnj11Q61743 390 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Hbs1lQ69ZS7 682 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Rbm4Q8C7Q4 361 aaKnown RBP11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 TrhdeQ8K093 1025 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 MfrpQ8K480 584 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Rbm4bQ8VE92 357 aaKnown RBP11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Lrrc49Q91YK0 686 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Usp26Q99MX1 835 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Dnajc19Q9CQV7 116 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Smg9Q9DB90 520 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Cib1Q9Z0F4 191 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 VarsQ9Z1Q9 1263 aaKnown RBP11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Bclaf3A2AG58 752 aaKnown RBP11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 1700064H15RikD3Z4D4 81 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 4930595D18RikD3Z642 64 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Cyp4a10O88833 509 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Csf2P01587 141 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Ldb1P70662 411 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Kcnd1Q03719 651 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Col28a1Q2UY11 1141 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Scube1Q6NZL8 1018 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Arl15Q8BGR6 204 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Vps9d1Q8C190 649 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Defb19Q8K3I8 83 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Krt88Q9CPR6 171 aa11.71□□□□□ -0.54
Scn8a-208ENSMUST00000200963 Glod5Q9D8I3 148 aa11.71□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms