RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Fabp3P11404 133 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 PrkchP23298 683 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Sox10Q04888 466 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Dcst1Q059Y8 732 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Hbs1lQ69ZS7 682 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Arl15Q8BGR6 204 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm4922Q8C0N0 497 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rdh14Q9ERI6 334 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Smim17A0A504 109 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm11397F6V5V4 377 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cdc6O89033 562 aaKnown RBP11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ddx6P54823 483 aaKnown RBP11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Etv6P97360 485 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Lypla1P97823 230 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Osgepl1Q6PEB4 414 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Serpinb9fQ80UK5 377 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Igdcc3Q8BQC3 813 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Serpinb9gQ8VHQ1 377 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zbed3Q9D0L1 228 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Sppl2aQ9JJF9 523 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fam209A2APA5 170 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fam83cA2ARK0 776 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Arhgap9Q1HDU4 648 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp953Q3UPV7 304 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ift52Q62559 426 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mrgpra1Q91WW5 304 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Dnaja2Q9QYJ0 412 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cep170bQ80U49 1574 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slfn8B1ARD8 910 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ifnar2O35664 513 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Atxn1P54254 791 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tgtp2Q3T9E4 415 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Trp53i11Q4QQM4 189 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tmem65Q4VAE3 234 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Six2Q62232 296 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tgtp1Q62293 415 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Nr2e1Q64104 385 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Olfr867Q7TRF3 331 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slc39a9Q8BFU1 308 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 4933402J07RikQ8BHX0 270 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Golm1Q91XA2 393 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Atp6v1c2Q99L60 427 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tpra1Q99MU1 369 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tmem114Q9D563 222 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ebna1bp2Q9D903 306 aaKnown RBP11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Pramef17A2ASJ1 475 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 AladP10518 330 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ntf3P20181 258 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Acvr2bP27040 536 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tgm3Q08189 693 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm45902Q3UDN3 361 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 P4ha3Q6W3F0 542 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rbm47Q91WT8 590 aaKnown RBP11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Pskh1Q91YA2 424 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tmem159Q922Z1 161 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Themis3Q9CU24 569 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ephx1Q9D379 455 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Paqr5Q9DCU0 330 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Il22Q9JJY9 179 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Chd2E9PZM4 1827 aaKnown RBP11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mfsd13bA0A1L1SUA2 455 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fbxl16A2RT62 479 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Q32M26 199 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Lingo2Q3URE9 606 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 PtprnQ60673 979 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Adam39Q7M762 756 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Plppr4Q7TME0 766 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slitrk4Q810B8 837 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp189Q8BKP2 608 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 PpatQ8CIH9 517 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Map3k14Q9WUL6 942 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 JhyE9Q793 770 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mov10P23249 1004 aaKnown RBP11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 HalP35492 657 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 CtscP97821 462 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Pak6Q3ULB5 682 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Q810M1 233 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cnot11Q9CWN7 505 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ist1Q9CX00 362 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Kdelc1Q9JHP7 502 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tfr2Q9JKX3 798 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp607bG3X9H3 648 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp957Q3UT76 567 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Smpd4Q6ZPR5 823 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Olfr801Q8VEU1 318 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Kiaa0141Q9DCV6 510 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mtmr9Q9Z2D0 545 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gnpda1O88958 289 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 R3hdm4Q4VBF2 262 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cdh24Q6PFX6 781 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Naaladl1Q7M758 745 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Znf592Q8BHZ4 1262 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 R3hcc1lQ8BJM3 775 aaKnown RBP11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fam53cQ8BXQ8 393 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ppp1r11Q8K1L5 131 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ehd1Q9WVK4 534 aaKnown RBP11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 HephQ9Z0Z4 1157 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fam205a1D3YZF6 1314 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm10324L7N208 604 aa11.85□□□□□ -0.51
Trim56-201ENSMUST00000054384 Q3UE31 404 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms