RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Cldn19Q9ET38 224 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pias4Q9JM05 507 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Epb41l4bQ9JMC8 527 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 S1pr4Q9Z0L1 386 aa13.33□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc28a1E9PXX9 648 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rnf169E9Q7F2 694 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zfp938E9Q9G3 579 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Vmn2r67K7N6T2 851 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fgf10O35565 209 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hoxc11P31313 304 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 WarsP32921 481 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tnfsf4P43488 198 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Serpina5P70458 405 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Grin2cQ01098 1239 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tmc5Q32NZ6 967 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zc3h15Q3TIV5 426 aaKnown RBP13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cyp2j13Q3UNV4 503 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 NkaplQ5SZT7 395 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gja6Q6S5G4 283 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lrfn2Q80TG9 788 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ppp1r1cQ8BKK4 108 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rdh12Q8BYK4 316 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 4933409G03RikQ8C5U0 320 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ccdc17Q8CE13 565 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 IlkapQ8R0F6 392 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Setd7Q8VHL1 366 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 NlnQ91YP2 704 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 EedQ921E6 441 aaKnown RBP13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Scd3Q99PL7 359 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ifitm3Q9CQW9 137 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ribc2Q9D4Q1 309 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fundc2Q9D6K8 151 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Q9D9D9 101 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 AcadsbQ9DBL1 432 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 ScelQ9EQG3 652 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mgea5Q9EQQ9 916 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rdh11Q9QYF1 316 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mad2l1Q9Z1B5 205 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cylc1A0A1B0GR13 642 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Smurf2A2A5Z6 748 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Itga8A2ARA8 1062 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Znf518bB2RRE4 1077 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm3642K7N6V4 267 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Aif1O70200 147 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Enpp1P06802 906 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfml2bQ3V1G4 746 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 KrtdapQ3V2T4 102 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rasgrp3Q6NZH9 691 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tatdn1Q6P8M1 295 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Magee1Q6PCZ4 918 aaKnown RBP13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr1128Q7TR47 311 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 B3gnt5Q8BGY6 376 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 DglucyQ8BH86 617 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lmcd1Q8VEE1 365 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 SgshQ9EQ08 502 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 MkksQ9JI70 570 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hs6st1Q9QYK5 411 aa13.32□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fam166bA2AIP0 273 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ttll9A2APC3 461 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pgbd1E9Q492 415 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Vmn2r86G5E8Y4 848 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ccdc153P0C7Q1 202 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 ThrbP37242 461 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ppp3ccP48455 513 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pold1P52431 1105 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rab8aP55258 207 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hoxb13P70321 286 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Uba1Q02053 1058 aaKnown RBP13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Eif2ak2Q03963 515 aaKnown RBP13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Sap25Q1EHW4 186 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr616Q3KPB0 317 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fam71bQ5STT6 665 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tpd52Q62393 224 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc25a23Q6GQS1 467 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cdc14bQ6PFY9 485 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ofcc1Q8BGX4 166 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ppp1r3eQ8BRJ4 279 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hs3st5Q8BSL4 346 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ifi44Q8BV66 422 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 MaelQ8BVN9 434 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lrch3Q8BVU0 778 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slfn5Q8CBA2 884 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 BroxQ8K2Q7 411 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Kctd11Q8K485 232 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 BfarQ8R079 450 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Sirt3Q8R104 334 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 C1qtnf12Q8R2Z0 308 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr854Q8VFF1 315 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pcdhga4Q91XY4 930 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pycr2Q922Q4 320 aaKnown RBP13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 4933425L06RikQ9D3Z8 585 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 P33monoxQ9DBN4 303 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Wdr12Q9JJA4 423 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Arih2Q9Z1K6 492 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 LctF8VPT3 1931 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lgr4A2ARI4 951 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Supt3B0QZW4 406 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lipo4D3Z608 396 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm8267E9Q207 261 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tmigd3G3X8R9 209 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms