RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Lrrc58Q3UGP9 366 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 CamkvQ3UHL1 512 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Glb1l2Q3UPY5 636 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Brsk2Q69Z98 735 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Ces2bQ6PDB7 556 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Kif18bQ6PFD6 834 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Olfr846Q8VET8 312 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Olfr183Q8VFB9 309 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Olfr345Q8VGK4 311 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Rnf31Q924T7 1066 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Zfp773Q9CZ29 471 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Nectin1Q9JKF6 515 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Rnf11Q9QYK7 154 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Cacna1cQ01815 2139 aa12.6□□□□□ -0.39
Rnf4-201ENSMUST00000030992 PikfyveQ9Z1T6 2097 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Igkv17-121A0A0G2JFA8 117 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 4933424G06RikA0A140LIP3 267 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Akap17bA2A3V1 959 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Znf143O70230 638 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Pou3f3P31361 497 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 FpgsP48760 587 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Hsd17b4P51660 735 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Jak1P52332 1153 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Cdh5P55284 784 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Ptchd3Q0EEE2 906 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Wdr36Q3TAQ9 899 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Fbxw18Q3TSA9 469 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Hesx1Q61658 185 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Actr3bQ641P0 418 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Actr5Q80US4 605 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Q8BWQ6 963 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Abi3Q8BYZ1 367 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Nkiras1Q8CEC5 192 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Sept8Q8CHH9 429 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Olfr1311Q8VET0 312 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 NlnQ91YP2 704 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 GhdcQ99J23 532 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Cpxm2Q9D2L5 764 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Snrnp48Q9D361 337 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Mkrn2Q9ERV1 416 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Stk19Q9JHN8 254 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Nrf1Q9WU00 503 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Cyb561d2Q9WUE3 222 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Rnf169E9Q7F2 694 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 P01636 108 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 P01648 108 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Fv4P11370 679 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Htr7P32304 448 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 SmoP56726 793 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Rap1gap2Q5SVL6 712 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 A4galtQ67BJ4 359 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Smarcal1Q8BJL0 910 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 MtbpQ8BJS8 894 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Tgm6Q8BM11 706 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 HadhaQ8BMS1 763 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Nae1Q8VBW6 534 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 SmtnQ921U8 923 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Itfg1Q99KW9 610 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Tchhl1Q9D3P1 638 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Cyb5r1Q9DB73 305 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Slc28a3Q9ERH8 703 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 NfkbizQ9EST8 728 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Smad9Q9JIW5 430 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 RpgrQ9R0X5 1001 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Ankrd34aB2RW11 495 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Vmn2r73D3Z7M3 851 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Ceacam3E9Q6J4 706 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 RfngO09009 332 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 P01665 111 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 P01666 111 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Ckmt1P30275 418 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Defa8P50706 81 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Sephs2P97364 452 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Mthfd1lQ3V3R1 977 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Arnt2Q61324 712 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Kir3dl2Q673W2 388 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Fam126aQ6P9N1 521 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Rexo4Q6PAQ4 432 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Vwa2Q70UZ7 791 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 H2-M10.2Q85ZW9 329 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 FicdQ8BIX9 458 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Vrk2Q8BN21 503 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Sfr1Q8BP27 319 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Mettl3Q8C3P7 580 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Defb19Q8K3I8 83 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Rbmx2Q8R0F5 326 aaKnown RBP12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Pcdhgc3Q91XX1 934 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Cers2Q924Z4 380 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Nudt7Q99P30 236 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Exoc2Q9D4H1 924 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Ccdc97Q9DBT3 340 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 GraspQ9JJA9 392 aa12.59□□□□□ -0.39
Rnf4-201ENSMUST00000030992 Vmn2r65G3X931 845 aa12.58□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Stc1O55183 247 aa12.58□□□□□ -0.4
Rnf4-201ENSMUST00000030992 JunbP09450 344 aaKnown RBP12.58□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Gpr25P0C5I1 358 aa12.58□□□□□ -0.4
Rnf4-201ENSMUST00000030992 CenpcP49452 906 aaKnown RBP12.58□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Lrig1P70193 1091 aa12.58□□□□□ -0.4
Rnf4-201ENSMUST00000030992 SirpaP97797 513 aa12.58□□□□□ -0.4
Rnf4-201ENSMUST00000030992 Cpne9Q1RLL3 553 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms