RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Gsk3bQ9WV60 420 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Trip11E9Q512 1976 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Fam166bA2AIP0 273 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Vmn2r65G3X931 845 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Nsmce4aG3XA30 381 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 H2-AaP01910 256 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Stt3aP46978 705 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Hnf4aP49698 474 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Rps24P62849 133 aaKnown RBP9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Hrh2P97292 397 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Lpcat1Q3TFD2 534 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Nutm2Q3V0C3 733 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 NkaplQ5SZT7 395 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Icam5Q60625 917 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Mon1aQ6PDG8 556 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Kirrel2Q7TSU7 700 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Suz12Q80U70 741 aaKnown RBP9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Fndc11Q80WB0 326 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Cpped1Q8BFS6 312 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Mterf2Q8BKY8 385 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Amer2Q8CCJ4 672 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Cfap61Q8CEL2 1252 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Snx8Q8CFD4 459 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Srfbp1Q9CZ91 441 aaKnown RBP9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Tmem53Q9D0Z3 276 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Nos1apQ9D3A8 503 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Cyp2c55Q9D816 490 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Timp4Q9JHB3 224 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Aldh1a3Q9JHW9 512 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Zfc3h1B2RT41 1992 aaKnown RBP9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Scn1aA2APX8 2009 aa9.4□□□□□ -0.9
Col6a1-201ENSMUST00000001147 Ubr3Q5U430 1889 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Marf1Q8BJ34 1730 aaKnown RBP9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Grin3aA2AIR5 1135 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mup6A2AV72 179 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Krt28A6BLY7 462 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Krt83E9Q1Y9 479 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Serpine3E9Q6A2 401 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Zfp846G3X996 541 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sgo2bJ3QMK1 1167 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Fam181aJ3QNB7 292 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gm5152L7N200 190 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 P01641 117 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gria1P23818 907 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pax3P24610 479 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 FynP39688 537 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 F8a1Q00558 380 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Lrrc74bQ14BP6 391 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Tmem102Q3UPR7 509 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Il17aQ62386 158 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Kctd13Q8BGV7 329 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Parp12Q8BZ20 711 aaKnown RBP9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Psapl1Q8C1C1 522 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Fam126bQ8C729 530 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 MiosQ8VE19 875 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Det1Q9D0A0 550 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 EbplQ9D0P0 206 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Tex22Q9D9U4 189 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rpn2Q9DBG6 631 aaKnown RBP9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Chrnb2Q9ERK7 501 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 NckipsdQ9ESJ4 714 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Nme7Q9QXL8 395 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Katna1Q9WV86 491 aa9.4□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Itga8A2ARA8 1062 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vmn1r238E9Q373 306 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Socs2O35717 198 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pik3cdO35904 1043 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Nfkb1P25799 971 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 OstnP61364 130 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Npy2rP97295 381 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 PrlrQ08501 608 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Naa11Q3UX61 218 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Myo1dQ5SYD0 1006 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 JrkQ60976 557 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sema4aQ62178 760 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Olfr295Q7TS08 309 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Klhl26Q8BGY4 606 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sema3dQ8BH34 777 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Tbc1d10bQ8BHL3 798 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Tyw1Q8BJM7 721 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slc25a24Q8BMD8 475 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slco2b1Q8BXB6 683 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Usp3Q91W36 520 aaKnown RBP9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Lypd3Q91YK8 363 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slc35a5Q921R7 437 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 DenrQ9CQJ6 198 aaKnown RBP9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ola1Q9CZ30 396 aaKnown RBP9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sae1Q9R1T2 350 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Umodl1Q5DID3 1319 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mia3Q8BI84 1930 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 S100zB9EJL3 99 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Adh6aE9Q5Z6 375 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vmn2r88L7N1W8 857 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vmn2r46L7N282 809 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 MaptP10637 733 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 HpcaP84075 193 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Fam35aQ3UEN2 891 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Snx21Q3UR97 363 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 MlipQ5FW52 269 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Adamts16Q69Z28 1222 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms