RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP1	YGR178C	BUD14	P27637	709 aa		10.89	□□□□□ -0.67
PBP1	YGR178C	TIF4632	P39936	914 aa	Known RBP	10.89	□□□□□ -0.67
PBP1	YGR178C	YNL193W	P53870	558 aa		10.89	□□□□□ -0.67
PBP1	YGR178C	BET4	Q00618	327 aa		10.89	□□□□□ -0.67
PBP1	YGR178C	ERV41	Q04651	352 aa		10.89	□□□□□ -0.67
PBP1	YGR178C	EST2	Q06163	884 aa		10.89	□□□□□ -0.67
PBP1	YGR178C	SEC18	P18759	758 aa	Known RBP	10.88	□□□□□ -0.67
PBP1	YGR178C	LAS1	P36146	502 aa	Predicted RBP	10.88	□□□□□ -0.67
PBP1	YGR178C	YPL109C	Q02981	657 aa		10.88	□□□□□ -0.67
PBP1	YGR178C	FCP1	Q03254	732 aa		10.88	□□□□□ -0.67
PBP1	YGR178C	PSR2	Q07949	397 aa		10.88	□□□□□ -0.67
PBP1	YGR178C	GET3	Q12154	354 aa	Known RBP	10.88	□□□□□ -0.67
PBP1	YGR178C	PIF1	P07271	859 aa		10.87	□□□□□ -0.67
PBP1	YGR178C	MPH3	P0CE00	602 aa		10.87	□□□□□ -0.67
PBP1	YGR178C	CLB4	P24871	460 aa		10.87	□□□□□ -0.67
PBP1	YGR178C	CDC10	P25342	322 aa	Known RBP	10.87	□□□□□ -0.67
PBP1	YGR178C	PDC6	P26263	563 aa	Known RBP	10.87	□□□□□ -0.67
PBP1	YGR178C	UBP14	P38237	781 aa	Known RBP	10.87	□□□□□ -0.67
PBP1	YGR178C	HFM1	P51979	1187 aa		10.87	□□□□□ -0.67
PBP1	YGR178C	GCD2	P12754	651 aa	Predicted RBP	10.87	□□□□□ -0.67
PBP1	YGR178C	PSO2	P30620	661 aa		10.87	□□□□□ -0.67
PBP1	YGR178C	YAP5	P40574	245 aa		10.87	□□□□□ -0.67
PBP1	YGR178C	VPS53	P47061	822 aa		10.87	□□□□□ -0.67
PBP1	YGR178C	SLM3	Q12093	417 aa		10.87	□□□□□ -0.67
PBP1	YGR178C	BMH1	P29311	267 aa	Known RBP	10.86	□□□□□ -0.67
PBP1	YGR178C	VFA1	P40080	203 aa		10.86	□□□□□ -0.67
PBP1	YGR178C	PKH1	Q03407	766 aa		10.86	□□□□□ -0.67
PBP1	YGR178C	SWI4	P25302	1093 aa	Known RBP	10.86	□□□□□ -0.67
PBP1	YGR178C	ENP2	P48234	707 aa	Known RBP	10.86	□□□□□ -0.67
PBP1	YGR178C	YMR114C	Q04471	368 aa	Known RBP	10.86	□□□□□ -0.67
PBP1	YGR178C	MMR1	Q06324	491 aa		10.86	□□□□□ -0.67
PBP1	YGR178C	RRP15	Q06511	250 aa	Predicted RBP	10.86	□□□□□ -0.67
PBP1	YGR178C	IME1	P21190	360 aa		10.85	□□□□□ -0.67
PBP1	YGR178C	VAN1	P23642	535 aa		10.85	□□□□□ -0.67
PBP1	YGR178C	RER2	P35196	286 aa		10.85	□□□□□ -0.67
PBP1	YGR178C	RPC25	P35718	212 aa		10.85	□□□□□ -0.67
PBP1	YGR178C	SPP381	P38282	291 aa	Predicted RBP	10.85	□□□□□ -0.67
PBP1	YGR178C	MAD1	P40957	749 aa		10.85	□□□□□ -0.67
PBP1	YGR178C	ADE16	P54113	591 aa	Known RBP	10.85	□□□□□ -0.67
PBP1	YGR178C	URH1	Q04179	340 aa		10.85	□□□□□ -0.67
PBP1	YGR178C	POB3	Q04636	552 aa	Known RBP	10.85	□□□□□ -0.67
PBP1	YGR178C	NEW1	Q08972	1196 aa	Known RBP	10.85	□□□□□ -0.67
PBP1	YGR178C	CWC2	Q12046	339 aa	Predicted RBP	10.85	□□□□□ -0.67
PBP1	YGR178C	SSF2	Q12153	453 aa	Predicted RBP	10.85	□□□□□ -0.67
PBP1	YGR178C	SAC3	P46674	1301 aa		10.85	□□□□□ -0.67
PBP1	YGR178C	PRP4	P20053	465 aa	Known RBP	10.84	□□□□□ -0.67
PBP1	YGR178C	CCT2	P39076	527 aa	Known RBP	10.84	□□□□□ -0.67
PBP1	YGR178C	GTR1	Q00582	310 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	UBP16	Q02863	499 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	ARO80	Q04052	950 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	VTI1	Q04338	217 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	SPP382	Q06411	708 aa	Predicted RBP	10.84	□□□□□ -0.67
PBP1	YGR178C	PTC5	Q12511	572 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	RSF2	P46974	1380 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	GFA1	P14742	717 aa	Known RBP	10.84	□□□□□ -0.67
PBP1	YGR178C	OAF3	P36023	863 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	MET1	P36150	593 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	LAM1	P38851	1228 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	IES1	P43579	692 aa		10.84	□□□□□ -0.67
PBP1	YGR178C	AIP1	P46680	615 aa	Known RBP	10.84	□□□□□ -0.67
PBP1	YGR178C	CSR1	Q06705	408 aa	Known RBP	10.84	□□□□□ -0.67
PBP1	YGR178C	PPR1	P07272	904 aa	Predicted RBP	10.83	□□□□□ -0.68
PBP1	YGR178C	GRX7	P38068	203 aa		10.83	□□□□□ -0.68
PBP1	YGR178C	XKS1	P42826	600 aa		10.83	□□□□□ -0.68
PBP1	YGR178C	MFM1	Q02783	413 aa		10.83	□□□□□ -0.68
PBP1	YGR178C	SPN1	Q06505	410 aa	Predicted RBP	10.83	□□□□□ -0.68
PBP1	YGR178C	KAR3	P17119	729 aa		10.83	□□□□□ -0.68
PBP1	YGR178C	CRG1	P38892	291 aa	RIP-Chip data	10.83	□□□□□ -0.68	not detected
PBP1	YGR178C	PTP3	P40048	928 aa		10.83	□□□□□ -0.68
PBP1	YGR178C	MSB3	P48566	633 aa	Predicted RBP	10.83	□□□□□ -0.68
PBP1	YGR178C	NKP1	Q12493	238 aa		10.83	□□□□□ -0.68
PBP1	YGR178C	DSF2	P38213	736 aa		10.82	□□□□□ -0.68
PBP1	YGR178C	BCD1	P38772	366 aa		10.82	□□□□□ -0.68
PBP1	YGR178C	YIL001W	P40560	513 aa		10.82	□□□□□ -0.68
PBP1	YGR178C	FAR11	P53917	953 aa		10.82	□□□□□ -0.68
PBP1	YGR178C	YOL075C	Q08234	1294 aa		10.82	□□□□□ -0.68
PBP1	YGR178C	APL5	Q08951	932 aa	Known RBP	10.82	□□□□□ -0.68
PBP1	YGR178C	RIB2	Q12362	591 aa	Known RBP	10.82	□□□□□ -0.68
PBP1	YGR178C	TAF9	Q05027	157 aa		10.82	□□□□□ -0.68
PBP1	YGR178C	MRD1	Q06106	887 aa	Known RBP	10.82	□□□□□ -0.68
PBP1	YGR178C	PRP5	P21372	849 aa	Predicted RBP	10.81	□□□□□ -0.68
PBP1	YGR178C	TFC3	P34111	1160 aa		10.81	□□□□□ -0.68
PBP1	YGR178C	BMH2	P34730	273 aa	Known RBP	10.81	□□□□□ -0.68
PBP1	YGR178C	YKU80	Q04437	629 aa		10.81	□□□□□ -0.68
PBP1	YGR178C	FAR8	Q05040	523 aa		10.81	□□□□□ -0.68
PBP1	YGR178C	PIG1	Q06216	648 aa		10.81	□□□□□ -0.68
PBP1	YGR178C	YPR204W	Q08995	1032 aa		10.81	□□□□□ -0.68
PBP1	YGR178C	SNU66	Q12420	587 aa	Predicted RBP	10.81	□□□□□ -0.68
PBP1	YGR178C	GCG1	P32656	232 aa	Known RBP	10.8	□□□□□ -0.68
PBP1	YGR178C	SQT1	P35184	431 aa		10.8	□□□□□ -0.68
PBP1	YGR178C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	10.8	□□□□□ -0.68	not detected
PBP1	YGR178C	YBR062C	P38239	180 aa		10.8	□□□□□ -0.68
PBP1	YGR178C	TDA3	P38758	523 aa		10.8	□□□□□ -0.68
PBP1	YGR178C	SPC24	Q04477	213 aa		10.8	□□□□□ -0.68
PBP1	YGR178C	NBL1	Q3E7Y6	73 aa		10.8	□□□□□ -0.68
PBP1	YGR178C	HIS4	P00815	799 aa	Known RBP	10.8	□□□□□ -0.68
PBP1	YGR178C	PYC1	P11154	1178 aa	Known RBP	10.8	□□□□□ -0.68
PBP1	YGR178C	FZO1	P38297	855 aa		10.8	□□□□□ -0.68
PBP1	YGR178C	LYS14	P40971	790 aa		10.8	□□□□□ -0.68
PBP1	YGR178C	TMA22	P47089	198 aa	Predicted RBP	10.8	□□□□□ -0.68

Retrieved 100 of 5,963 RNA–protein pairs in 93.5 ms