RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W SEC23P15303 768 aaKnown RBP7.98□□□□□ -1.13
SNU71YGR013W KAP122P32767 1081 aa7.98□□□□□ -1.13
SNU71YGR013W AIM46P38885 310 aa7.98□□□□□ -1.13
SNU71YGR013W IES5P40060 125 aa7.98□□□□□ -1.13
SNU71YGR013W YGL140CP53120 1219 aa7.98□□□□□ -1.13
SNU71YGR013W RPC31P17890 251 aa7.97□□□□□ -1.13
SNU71YGR013W MRT4P33201 236 aaKnown RBP7.97□□□□□ -1.13
SNU71YGR013W YBR287WP38355 427 aa7.97□□□□□ -1.13
SNU71YGR013W GEM1P39722 662 aa7.97□□□□□ -1.13
SNU71YGR013W SAP155P43612 1002 aa7.97□□□□□ -1.13
SNU71YGR013W COG6P53959 839 aa7.97□□□□□ -1.13
SNU71YGR013W YOR296WQ08748 1289 aa7.97□□□□□ -1.13
SNU71YGR013W REC8Q12188 680 aa7.97□□□□□ -1.13
SNU71YGR013W NPR1P22211 790 aa7.96□□□□□ -1.13
SNU71YGR013W PYC2P32327 1180 aaKnown RBP7.96□□□□□ -1.13
SNU71YGR013W DLD3P39976 496 aaKnown RBP7.96□□□□□ -1.13
SNU71YGR013W YDL124WQ07551 312 aaKnown RBP7.96□□□□□ -1.13
SNU71YGR013W RPS31P05759 152 aaKnown RBP7.96□□□□□ -1.14
SNU71YGR013W MEF1P25039 761 aa7.96□□□□□ -1.14
SNU71YGR013W SAP30P38429 201 aa7.96□□□□□ -1.14
SNU71YGR013W YML082WQ04533 649 aaKnown RBP7.96□□□□□ -1.14
SNU71YGR013W MOT2P34909 587 aaKnown RBP7.95□□□□□ -1.14
SNU71YGR013W ALA1P40825 983 aaKnown RBP7.95□□□□□ -1.14
SNU71YGR013W SIW14P53965 281 aa7.95□□□□□ -1.14
SNU71YGR013W PMT7Q06644 662 aa7.95□□□□□ -1.14
SNU71YGR013W GIC2Q06648 383 aa7.95□□□□□ -1.14
SNU71YGR013W MKK2P32491 506 aa7.94□□□□□ -1.14
SNU71YGR013W YBR071WP38243 211 aa7.94□□□□□ -1.14
SNU71YGR013W NOC2P39744 710 aaKnown RBP7.94□□□□□ -1.14
SNU71YGR013W VPS27P40343 622 aaKnown RBP7.94□□□□□ -1.14
SNU71YGR013W GPP1P41277 250 aaKnown RBP7.94□□□□□ -1.14
SNU71YGR013W MTC5Q03897 1148 aa7.94□□□□□ -1.14
SNU71YGR013W YLR001CQ07895 862 aa7.94□□□□□ -1.14
SNU71YGR013W FAP7Q12055 197 aaPredicted RBP7.94□□□□□ -1.14
SNU71YGR013W TAF13P11747 167 aa7.94□□□□□ -1.14
SNU71YGR013W YEF3P16521 1044 aaKnown RBP7.94□□□□□ -1.14
SNU71YGR013W PEX13P80667 386 aa7.94□□□□□ -1.14
SNU71YGR013W NPL3Q01560 414 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
SNU71YGR013W GIR2Q03768 265 aaPredicted RBP7.94□□□□□ -1.14
SNU71YGR013W PRP9P19736 530 aaKnown RBP7.93□□□□□ -1.14
SNU71YGR013W EUG1P32474 517 aa7.93□□□□□ -1.14
SNU71YGR013W SHM1P37292 490 aaPredicted RBP7.93□□□□□ -1.14
SNU71YGR013W AMN1P38285 549 aaPredicted RBP7.93□□□□□ -1.14
SNU71YGR013W BDP1P46678 594 aa7.93□□□□□ -1.14
SNU71YGR013W MPD2Q99316 277 aa7.93□□□□□ -1.14
SNU71YGR013W APM2P38700 605 aa7.92□□□□□ -1.14
SNU71YGR013W MTR4P47047 1073 aaKnown RBP7.92□□□□□ -1.14
SNU71YGR013W NOG1Q02892 647 aaKnown RBP7.92□□□□□ -1.14
SNU71YGR013W ESP1Q03018 1630 aa7.92□□□□□ -1.14
SNU71YGR013W INO1P11986 533 aa7.92□□□□□ -1.14
SNU71YGR013W MTC2P34246 357 aa7.92□□□□□ -1.14
SNU71YGR013W SSN3P39073 555 aa7.92□□□□□ -1.14
SNU71YGR013W PEA2P40091 420 aa7.92□□□□□ -1.14
SNU71YGR013W YNL034WP53963 612 aa7.92□□□□□ -1.14
SNU71YGR013W YNL018CP53976 612 aa7.92□□□□□ -1.14
SNU71YGR013W MDM12Q92328 271 aa7.92□□□□□ -1.14
SNU71YGR013W RIM11P38615 370 aa7.91□□□□□ -1.14
SNU71YGR013W MBP1P39678 833 aa7.91□□□□□ -1.14
SNU71YGR013W SEC26P41810 973 aaKnown RBP7.91□□□□□ -1.14
SNU71YGR013W PEX14P53112 341 aa7.91□□□□□ -1.14
SNU71YGR013W SDA1P53313 767 aaKnown RBP7.91□□□□□ -1.14
SNU71YGR013W ROD1Q02805 837 aa7.91□□□□□ -1.14
SNU71YGR013W ENT2Q05785 613 aa7.91□□□□□ -1.14
SNU71YGR013W HBN1Q96VH4 193 aa7.91□□□□□ -1.14
SNU71YGR013W SST2P11972 698 aaKnown RBP7.9□□□□□ -1.14
SNU71YGR013W TOP3P13099 656 aa7.9□□□□□ -1.14
SNU71YGR013W MSH3P25336 1018 aa7.9□□□□□ -1.14
SNU71YGR013W POL5P39985 1022 aaKnown RBP7.9□□□□□ -1.14
SNU71YGR013W YIL165CP40446 119 aa7.9□□□□□ -1.14
SNU71YGR013W JJJ2P46997 583 aa7.9□□□□□ -1.14
SNU71YGR013W RPN12P32496 274 aa7.89□□□□□ -1.15
SNU71YGR013W SAS4Q04003 481 aa7.89□□□□□ -1.15
SNU71YGR013W CMR1Q12510 522 aaKnown RBP7.89□□□□□ -1.15
SNU71YGR013W PGI1P12709 554 aaKnown RBP7.89□□□□□ -1.15
SNU71YGR013W PLC1P32383 869 aa7.89□□□□□ -1.15
SNU71YGR013W HBS1P32769 611 aaKnown RBP7.89□□□□□ -1.15
SNU71YGR013W YKL222CP35995 705 aa7.89□□□□□ -1.15
SNU71YGR013W RDH54P38086 958 aa7.89□□□□□ -1.15
SNU71YGR013W DSS1P39112 969 aa7.89□□□□□ -1.15
SNU71YGR013W VID27P40157 782 aa7.89□□□□□ -1.15
SNU71YGR013W YTA6P40328 754 aa7.89□□□□□ -1.15
SNU71YGR013W UBX4P54730 416 aa7.89□□□□□ -1.15
SNU71YGR013W YPL066WQ12194 479 aa7.89□□□□□ -1.15
SNU71YGR013W YCF1P39109 1515 aaKnown RBP7.89□□□□□ -1.15
SNU71YGR013W UFD4P33202 1483 aa7.88□□□□□ -1.15
SNU71YGR013W YPK9Q12697 1472 aa7.88□□□□□ -1.15
SNU71YGR013W TYS1P36421 394 aaKnown RBP7.88□□□□□ -1.15
SNU71YGR013W BAP2P38084 609 aa7.88□□□□□ -1.15
SNU71YGR013W CCC2P38995 1004 aa7.88□□□□□ -1.15
SNU71YGR013W ENT3P47160 408 aa7.88□□□□□ -1.15
SNU71YGR013W TIF35Q04067 274 aaKnown RBP7.88□□□□□ -1.15
SNU71YGR013W GYP1Q08484 637 aa7.87□□□□□ -1.15
SNU71YGR013W MFT1P33441 392 aaKnown RBP7.87□□□□□ -1.15
SNU71YGR013W PIN4P34217 668 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
SNU71YGR013W TOM70P07213 617 aaKnown RBP7.86□□□□□ -1.15
SNU71YGR013W MGS1P40151 587 aa7.86□□□□□ -1.15
SNU71YGR013W YGL176CP46945 554 aa7.86□□□□□ -1.15
SNU71YGR013W CUS1Q02554 436 aaPredicted RBP7.86□□□□□ -1.15
SNU71YGR013W TRE2Q08693 809 aa7.86□□□□□ -1.15
SNU71YGR013W RKM4Q12504 494 aa7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms