RNA–Protein interactions for RNA: ENST00000640906.1

FRMD4A-212, Transcript of FERM domain containing 4A, humanhuman

TSL 4

Gene FRMD4A, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-212ENST00000640906 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
FRMD4A-212ENST00000640906 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
FRMD4A-212ENST00000640906 DDB1Q16531 1140 aa12.73□□□□□ -0.37
FRMD4A-212ENST00000640906 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
FRMD4A-212ENST00000640906 WNK3Q9BYP7 1800 aa12.73□□□□□ -0.37
FRMD4A-212ENST00000640906 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
FRMD4A-212ENST00000640906 RGPD2P0DJD1 1756 aa12.72□□□□□ -0.37
FRMD4A-212ENST00000640906 ANP32CO43423 234 aa12.72□□□□□ -0.37
FRMD4A-212ENST00000640906 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
FRMD4A-212ENST00000640906 FCHSD2O94868 740 aa12.71□□□□□ -0.37
FRMD4A-212ENST00000640906 PDE3BQ13370 1112 aa12.71□□□□□ -0.37
FRMD4A-212ENST00000640906 AMOTQ4VCS5 1084 aa12.71□□□□□ -0.37
FRMD4A-212ENST00000640906 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
FRMD4A-212ENST00000640906 NKX1-1Q15270 411 aaPredicted RBP12.7□□□□□ -0.38
FRMD4A-212ENST00000640906 FAM196AQ6ZSG2 479 aa12.7□□□□□ -0.38
FRMD4A-212ENST00000640906 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
FRMD4A-212ENST00000640906 MEGF6O75095 1541 aa12.7□□□□□ -0.38
FRMD4A-212ENST00000640906 BRWD3Q6RI45 1802 aa12.69□□□□□ -0.38
FRMD4A-212ENST00000640906 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
FRMD4A-212ENST00000640906 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
FRMD4A-212ENST00000640906 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
FRMD4A-212ENST00000640906 MARCH10Q8NA82 808 aaPredicted RBP12.69□□□□□ -0.38
FRMD4A-212ENST00000640906 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
FRMD4A-212ENST00000640906 LRRC37A3O60309 1634 aa12.69□□□□□ -0.38
FRMD4A-212ENST00000640906 EP400Q96L91 3159 aa12.68□□□□□ -0.38
FRMD4A-212ENST00000640906 SLC4A2P04920 1241 aa12.68□□□□□ -0.38
FRMD4A-212ENST00000640906 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
FRMD4A-212ENST00000640906 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
FRMD4A-212ENST00000640906 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
FRMD4A-212ENST00000640906 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
FRMD4A-212ENST00000640906 CAPN15O75808 1086 aa12.67□□□□□ -0.38
FRMD4A-212ENST00000640906 AEBP1Q8IUX7 1158 aa12.67□□□□□ -0.38
FRMD4A-212ENST00000640906 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
FRMD4A-212ENST00000640906 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
FRMD4A-212ENST00000640906 PKD1L3Q7Z443 1732 aa12.67□□□□□ -0.38
FRMD4A-212ENST00000640906 A0A0G2JS52 829 aa12.66□□□□□ -0.38
FRMD4A-212ENST00000640906 MYT1Q01538 1121 aa12.66□□□□□ -0.38
FRMD4A-212ENST00000640906 SOCS7O14512 581 aa12.65□□□□□ -0.38
FRMD4A-212ENST00000640906 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
FRMD4A-212ENST00000640906 CYP27B1O15528 508 aa12.65□□□□□ -0.38
FRMD4A-212ENST00000640906 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.38
FRMD4A-212ENST00000640906 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.38
FRMD4A-212ENST00000640906 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
FRMD4A-212ENST00000640906 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
FRMD4A-212ENST00000640906 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
FRMD4A-212ENST00000640906 SHANK3Q9BYB0 1731 aa12.63□□□□□ -0.39
FRMD4A-212ENST00000640906 HMOX1P09601 288 aa12.63□□□□□ -0.39
FRMD4A-212ENST00000640906 PHKG2P15735 406 aa12.63□□□□□ -0.39
FRMD4A-212ENST00000640906 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.39
FRMD4A-212ENST00000640906 BCL11BQ9C0K0 894 aaPredicted RBP12.63□□□□□ -0.39
FRMD4A-212ENST00000640906 CCER2I3L3R5 266 aa12.62□□□□□ -0.39
FRMD4A-212ENST00000640906 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
FRMD4A-212ENST00000640906 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
FRMD4A-212ENST00000640906 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
FRMD4A-212ENST00000640906 DDX54Q8TDD1 881 aaKnown RBP12.62□□□□□ -0.39
FRMD4A-212ENST00000640906 PNISRQ8TF01 805 aaKnown RBP12.62□□□□□ -0.39
FRMD4A-212ENST00000640906 DCAF5Q96JK2 942 aa12.62□□□□□ -0.39
FRMD4A-212ENST00000640906 ERVV-2B6SEH9 535 aa12.61□□□□□ -0.39
FRMD4A-212ENST00000640906 HTATSF1O43719 755 aaKnown RBP12.61□□□□□ -0.39
FRMD4A-212ENST00000640906 PRKAR2BP31323 418 aa12.61□□□□□ -0.39
FRMD4A-212ENST00000640906 ZNF530Q6P9A1 599 aaPredicted RBP12.61□□□□□ -0.39
FRMD4A-212ENST00000640906 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
FRMD4A-212ENST00000640906 PLSCR1O15162 318 aa12.6□□□□□ -0.39
FRMD4A-212ENST00000640906 MTHFSDQ2M296 383 aaKnown RBP12.6□□□□□ -0.39
FRMD4A-212ENST00000640906 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
FRMD4A-212ENST00000640906 ADAMTS8Q9UP79 889 aa12.6□□□□□ -0.39
FRMD4A-212ENST00000640906 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
FRMD4A-212ENST00000640906 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
FRMD4A-212ENST00000640906 C1orf141Q5JVX7 400 aa12.59□□□□□ -0.39
FRMD4A-212ENST00000640906 NEFMP07197 916 aa12.58□□□□□ -0.4
FRMD4A-212ENST00000640906 DSG3P32926 999 aa12.58□□□□□ -0.4
FRMD4A-212ENST00000640906 FAM182BQ5T319 152 aa12.58□□□□□ -0.4
FRMD4A-212ENST00000640906 RUNDC1Q96C34 613 aa12.58□□□□□ -0.4
FRMD4A-212ENST00000640906 MRS2Q9HD23 443 aa12.58□□□□□ -0.4
FRMD4A-212ENST00000640906 ADAMTS7Q9UKP4 1686 aa12.57□□□□□ -0.4
FRMD4A-212ENST00000640906 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
FRMD4A-212ENST00000640906 TRIM37O94972 964 aa12.57□□□□□ -0.4
FRMD4A-212ENST00000640906 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 RNMTO43148 476 aaKnown RBP12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 NFE2L2Q16236 605 aa12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 KAT6BQ8WYB5 2073 aa12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
FRMD4A-212ENST00000640906 KDM6AO15550 1401 aaPredicted RBP12.55□□□□□ -0.4
FRMD4A-212ENST00000640906 KCNQ2O43526 872 aa12.55□□□□□ -0.4
FRMD4A-212ENST00000640906 NGEFQ8N5V2 710 aa12.55□□□□□ -0.4
FRMD4A-212ENST00000640906 CAMKK2Q96RR4 588 aa12.55□□□□□ -0.4
FRMD4A-212ENST00000640906 BAG6P46379 1132 aa12.54□□□□□ -0.4
FRMD4A-212ENST00000640906 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
FRMD4A-212ENST00000640906 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
FRMD4A-212ENST00000640906 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
FRMD4A-212ENST00000640906 MRC1P22897 1456 aa12.53□□□□□ -0.4
FRMD4A-212ENST00000640906 APBA3O96018 575 aa12.53□□□□□ -0.4
FRMD4A-212ENST00000640906 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
FRMD4A-212ENST00000640906 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
FRMD4A-212ENST00000640906 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
FRMD4A-212ENST00000640906 PIGBQ92521 554 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms