RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
SCARB2-224ENST00000640880 TUT1Q9H6E5 874 aaKnown RBP10.59□□□□□ -0.71
SCARB2-224ENST00000640880 EGFL7Q9UHF1 273 aa10.59□□□□□ -0.71
SCARB2-224ENST00000640880 ANO2Q9NQ90 1003 aa10.58□□□□□ -0.72
SCARB2-224ENST00000640880 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
SCARB2-224ENST00000640880 LGR5O75473 907 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 ADH1BP00325 375 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 AGERQ15109 404 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 ERFEQ4G0M1 354 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 RNF20Q5VTR2 975 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 NPAS4Q8IUM7 802 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
SCARB2-224ENST00000640880 GLYCTKQ8IVS8 523 aa10.56□□□□□ -0.72
SCARB2-224ENST00000640880 HINFPQ9BQA5 517 aa10.56□□□□□ -0.72
SCARB2-224ENST00000640880 PCDHGA11Q9Y5H2 935 aa10.56□□□□□ -0.72
SCARB2-224ENST00000640880 ICMTO60725 284 aa10.55□□□□□ -0.72
SCARB2-224ENST00000640880 ANKRD13DQ6ZTN6 518 aa10.55□□□□□ -0.72
SCARB2-224ENST00000640880 BPHLQ86WA6 291 aaPredicted RBP10.55□□□□□ -0.72
SCARB2-224ENST00000640880 SLC10A4Q96EP9 437 aa10.55□□□□□ -0.72
SCARB2-224ENST00000640880 LINC01559Q495D7 138 aa10.54□□□□□ -0.72
SCARB2-224ENST00000640880 BAP1Q92560 729 aa10.54□□□□□ -0.72
SCARB2-224ENST00000640880 FOXJ1Q92949 421 aa10.54□□□□□ -0.72
SCARB2-224ENST00000640880 PCDHB11Q9Y5F2 797 aa10.54□□□□□ -0.72
SCARB2-224ENST00000640880 MKNK1Q9BUB5 465 aa10.53□□□□□ -0.72
SCARB2-224ENST00000640880 ZPR1O75312 459 aa10.52□□□□□ -0.73
SCARB2-224ENST00000640880 MAPK1P28482 360 aa10.52□□□□□ -0.73
SCARB2-224ENST00000640880 USP4Q13107 963 aa10.52□□□□□ -0.73
SCARB2-224ENST00000640880 ZNF326Q5BKZ1 582 aaKnown RBP10.52□□□□□ -0.73
SCARB2-224ENST00000640880 GTF3C2Q8WUA4 911 aaPredicted RBP10.52□□□□□ -0.73
SCARB2-224ENST00000640880 SEPT3Q9UH03 358 aa10.52□□□□□ -0.73
SCARB2-224ENST00000640880 C21orf2O43822 256 aa10.51□□□□□ -0.73
SCARB2-224ENST00000640880 NBPF20Q3BBV1 942 aa10.51□□□□□ -0.73
SCARB2-224ENST00000640880 C4orf48Q5BLP8 95 aa10.51□□□□□ -0.73
SCARB2-224ENST00000640880 ZNF511Q8NB15 262 aa10.51□□□□□ -0.73
SCARB2-224ENST00000640880 TSEN2Q8NCE0 465 aaKnown RBP10.5□□□□□ -0.73
SCARB2-224ENST00000640880 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
SCARB2-224ENST00000640880 DNMT3AQ9Y6K1 912 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-224ENST00000640880 ESPNB1AK53 854 aa10.49□□□□□ -0.73
SCARB2-224ENST00000640880 TCF3P15923 654 aa10.48□□□□□ -0.73
SCARB2-224ENST00000640880 WEE1P30291 646 aa10.48□□□□□ -0.73
SCARB2-224ENST00000640880 FKBP5Q13451 457 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-224ENST00000640880 MTMR3Q13615 1198 aa10.48□□□□□ -0.73
SCARB2-224ENST00000640880 ASB16Q96NS5 453 aa10.48□□□□□ -0.73
SCARB2-224ENST00000640880 MTRQ99707 1265 aa10.48□□□□□ -0.73
SCARB2-224ENST00000640880 DCTN4Q9UJW0 460 aa10.48□□□□□ -0.73
SCARB2-224ENST00000640880 FKBP4Q02790 459 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCARB2-224ENST00000640880 THSD4Q6ZMP0 1018 aa10.47□□□□□ -0.73
SCARB2-224ENST00000640880 CAPN12Q6ZSI9 719 aa10.47□□□□□ -0.73
SCARB2-224ENST00000640880 SEPT12Q8IYM1 358 aa10.47□□□□□ -0.73
SCARB2-224ENST00000640880 C1QTNF2Q9BXJ5 285 aa10.47□□□□□ -0.73
SCARB2-224ENST00000640880 M0R2N6 131 aa10.46□□□□□ -0.73
SCARB2-224ENST00000640880 MYCP01106 439 aaPredicted RBP10.46□□□□□ -0.73
SCARB2-224ENST00000640880 RAB15P59190 212 aa10.46□□□□□ -0.73
SCARB2-224ENST00000640880 SF3B2Q13435 895 aaKnown RBP10.46□□□□□ -0.73
SCARB2-224ENST00000640880 ECM1Q16610 540 aa10.46□□□□□ -0.73
SCARB2-224ENST00000640880 FBXO33Q7Z6M2 555 aa10.46□□□□□ -0.73
SCARB2-224ENST00000640880 PURBQ96QR8 312 aaKnown RBP10.46□□□□□ -0.73
SCARB2-224ENST00000640880 PTCD1O75127 700 aaKnown RBP10.45□□□□□ -0.74
SCARB2-224ENST00000640880 ARHGAP4P98171 946 aa10.45□□□□□ -0.74
SCARB2-224ENST00000640880 TAGLNQ01995 201 aaKnown RBP10.45□□□□□ -0.74
SCARB2-224ENST00000640880 CCDC125Q86Z20 511 aa10.45□□□□□ -0.74
SCARB2-224ENST00000640880 ZSCAN29Q8IWY8 852 aaPredicted RBP10.45□□□□□ -0.74
SCARB2-224ENST00000640880 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
SCARB2-224ENST00000640880 CDV3Q9UKY7 258 aaKnown RBP10.45□□□□□ -0.74
SCARB2-224ENST00000640880 TRMT44Q8IYL2 757 aaKnown RBP10.44□□□□□ -0.74
SCARB2-224ENST00000640880 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
SCARB2-224ENST00000640880 FCF1Q9Y324 198 aaKnown RBP10.44□□□□□ -0.74
SCARB2-224ENST00000640880 NYAP1Q6ZVC0 841 aa10.43□□□□□ -0.74
SCARB2-224ENST00000640880 ZNF516Q92618 1163 aa10.43□□□□□ -0.74
SCARB2-224ENST00000640880 ZNF358Q9NW07 568 aa10.43□□□□□ -0.74
SCARB2-224ENST00000640880 VAMP1P23763 118 aa10.42□□□□□ -0.74
SCARB2-224ENST00000640880 NAA30Q147X3 362 aaPredicted RBP10.42□□□□□ -0.74
SCARB2-224ENST00000640880 S1PR4O95977 384 aa10.41□□□□□ -0.74
SCARB2-224ENST00000640880 SH3BP2P78314 561 aa10.41□□□□□ -0.74
SCARB2-224ENST00000640880 HELQQ8TDG4 1101 aa10.41□□□□□ -0.74
SCARB2-224ENST00000640880 KCTD15Q96SI1 283 aaPredicted RBP10.41□□□□□ -0.74
SCARB2-224ENST00000640880 IL21Q9HBE4 155 aa10.41□□□□□ -0.74
SCARB2-224ENST00000640880 EIF4G1Q04637 1599 aaKnown RBP10.4□□□□□ -0.74
SCARB2-224ENST00000640880 SCTRP47872 440 aa10.4□□□□□ -0.74
SCARB2-224ENST00000640880 RGL4Q8IZJ4 473 aa10.4□□□□□ -0.74
SCARB2-224ENST00000640880 COL26A1Q96A83 441 aa10.4□□□□□ -0.74
SCARB2-224ENST00000640880 KCTD12Q96CX2 325 aaKnown RBP10.4□□□□□ -0.74
SCARB2-224ENST00000640880 FOXO3O43524 673 aa10.39□□□□□ -0.75
SCARB2-224ENST00000640880 IGFBP4P22692 258 aa10.39□□□□□ -0.75
SCARB2-224ENST00000640880 EAPPQ56P03 285 aaPredicted RBP10.39□□□□□ -0.75
SCARB2-224ENST00000640880 TJAP1Q5JTD0 557 aa10.39□□□□□ -0.75
SCARB2-224ENST00000640880 TMEM229AB2RXF0 380 aa10.38□□□□□ -0.75
SCARB2-224ENST00000640880 COL19A1Q14993 1142 aa10.38□□□□□ -0.75
SCARB2-224ENST00000640880 SCG3Q8WXD2 468 aaKnown RBP10.38□□□□□ -0.75
SCARB2-224ENST00000640880 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
SCARB2-224ENST00000640880 ESF1Q9H501 851 aaKnown RBP10.38□□□□□ -0.75
SCARB2-224ENST00000640880 FAM13AO94988 1023 aa10.37□□□□□ -0.75
SCARB2-224ENST00000640880 RECKO95980 971 aa10.37□□□□□ -0.75
SCARB2-224ENST00000640880 INTS6LQ5JSJ4 861 aaKnown RBP10.37□□□□□ -0.75
SCARB2-224ENST00000640880 ERVH48-1M5A8F1 160 aa10.36□□□□□ -0.75
SCARB2-224ENST00000640880 TNS4Q8IZW8 715 aa10.36□□□□□ -0.75
SCARB2-224ENST00000640880 NKX2-3Q8TAU0 364 aa10.36□□□□□ -0.75
SCARB2-224ENST00000640880 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms