RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	SLU7	O95391	586 aa	Known RBP	13.44	□□□□□ -0.26
SPIN3-231	ENST00000639895	FAM193A	P78312	1265 aa		13.44	□□□□□ -0.26
SPIN3-231	ENST00000639895	TRIM27	P14373	513 aa		13.44	□□□□□ -0.26
SPIN3-231	ENST00000639895	PKP1	Q13835	747 aa		13.44	□□□□□ -0.26
SPIN3-231	ENST00000639895	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.44	□□□□□ -0.26
SPIN3-231	ENST00000639895	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.44	□□□□□ -0.26
SPIN3-231	ENST00000639895	KIF2A	O00139	706 aa	Predicted RBP	13.44	□□□□□ -0.26
SPIN3-231	ENST00000639895	SSH1	Q8WYL5	1049 aa		13.44	□□□□□ -0.26
SPIN3-231	ENST00000639895	TARBP1	Q13395	1621 aa	Known RBP	13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	MTHFS	P49914	203 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	TERF2	Q15554	542 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	CCDC73	Q6ZRK6	1079 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	SLC26A8	Q96RN1	970 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	SDF4	Q9BRK5	362 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	CENPH	Q9H3R5	247 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	EIF3J	O75822	258 aa	Known RBP	13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	FKBP5	Q13451	457 aa	Predicted RBP	13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	FERMT3	Q86UX7	667 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	WDR63	Q8IWG1	891 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	STK26	Q9P289	416 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	ATP10B	O94823	1461 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895		A0A1B0GUL7	405 aa		13.43	□□□□□ -0.26
SPIN3-231	ENST00000639895	ARHGAP29	Q52LW3	1261 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	GPT2	Q8TD30	523 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	ADGRL2	O95490	1459 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	ARHGEF12	Q9NZN5	1544 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	CEBPZ	Q03701	1054 aa	Known RBP	13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	CAPN2	P17655	700 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	FOSB	P53539	338 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	KRT85	P78386	507 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	CCDC34	Q96HJ3	373 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	TMX3	Q96JJ7	454 aa		13.42	□□□□□ -0.26
SPIN3-231	ENST00000639895	PARD3	Q8TEW0	1356 aa		13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	MX1	P20591	662 aa		13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	HNRNPH2	P55795	449 aa	Known RBP	13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	PDILT	Q8N807	584 aa		13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	SKIL	P12757	684 aa		13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	CFAP70	Q5T0N1	1121 aa		13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	API5	Q9BZZ5	524 aa	Known RBP	13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	SNW1	Q13573	536 aa	Known RBP	13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	CCDC91	Q7Z6B0	441 aa		13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	TEX2	Q8IWB9	1127 aa		13.41	□□□□□ -0.26
SPIN3-231	ENST00000639895	CREBRF	Q8IUR6	639 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	UHRF1BP1	Q6BDS2	1440 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	CD2BP2	O95400	341 aa	Known RBP	13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	HDAC1	Q13547	482 aa	Predicted RBP	13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	ZSCAN26	Q16670	478 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	PDLIM2	Q96JY6	352 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	PYCARD	Q9ULZ3	195 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	SHANK2	Q9UPX8	1470 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	NUCB1	Q02818	461 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	LARP6	Q9BRS8	491 aa	Known RBP	13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	CNPY2	Q9Y2B0	182 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	DISP3	Q9P2K9	1392 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	ZNF165	P49910	485 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	UBE2H	P62256	183 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	MICALL1	Q8N3F8	863 aa		13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	NAT10	Q9H0A0	1025 aa	Known RBP	13.4	□□□□□ -0.26
SPIN3-231	ENST00000639895	LOC102724159	A0A0B4J2E5	919 aa		13.39	□□□□□ -0.27
SPIN3-231	ENST00000639895	PWP2	Q15269	919 aa	Known RBP	13.39	□□□□□ -0.27
SPIN3-231	ENST00000639895	KIAA0754	O94854	1291 aa		13.39	□□□□□ -0.27
SPIN3-231	ENST00000639895	PRAG1	Q86YV5	1406 aa		13.39	□□□□□ -0.27
SPIN3-231	ENST00000639895	ZNF215	Q9UL58	517 aa	Predicted RBP	13.39	□□□□□ -0.27
SPIN3-231	ENST00000639895	CCDC171	Q6TFL3	1326 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	KIN	O60870	393 aa	Known RBP	13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	SFPQ	P23246	707 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	ANKRD20A12P	Q8NF67	263 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	IVL	P07476	585 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	ZKSCAN1	P17029	563 aa	Predicted RBP	13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	MCM6	Q14566	821 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	FAM200A	Q8TCP9	573 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	ERO1A	Q96HE7	468 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	ERLIN1	O75477	346 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	ZNF710	Q8N1W2	664 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	EFCC1	Q9HA90	598 aa		13.38	□□□□□ -0.27
SPIN3-231	ENST00000639895	CCP110	O43303	1012 aa		13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	TPM1	P09493	284 aa		13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	CDR1	P51861	262 aa		13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	ERCC4	Q92889	916 aa	Predicted RBP	13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	ZSWIM4	Q9H7M6	989 aa		13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	ARFGAP3	Q9NP61	516 aa		13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	NAA30	Q147X3	362 aa	Predicted RBP	13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	LARP1B	Q659C4	914 aa	Known RBP	13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	FAM135A	Q9P2D6	1515 aa		13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	LUZP1	Q86V48	1076 aa		13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	SPATA32	Q96LK8	384 aa		13.37	□□□□□ -0.27
SPIN3-231	ENST00000639895	GADD45B	O75293	160 aa	Predicted RBP	13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	LRMP	Q12912	555 aa		13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	E2F4	Q16254	413 aa		13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	DMRT2	Q9Y5R5	561 aa		13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	CAST	P20810	708 aa	Known RBP	13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	CASQ1	P31415	396 aa		13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	SMARCA5	O60264	1052 aa	Predicted RBP	13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	NCBP1	Q09161	790 aa	Known RBP	13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	DDX41	Q9UJV9	622 aa	Known RBP	13.36	□□□□□ -0.27
SPIN3-231	ENST00000639895	EVC2	Q86UK5	1308 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms