RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 SYNJ2O15056 1496 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 KIF2AO00139 706 aaPredicted RBP13.15□□□□□ -0.3
SPIN3-230ENST00000639888 KRT85P78386 507 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 HDAC1Q13547 482 aaPredicted RBP13.15□□□□□ -0.3
SPIN3-230ENST00000639888 CT47A1Q5JQC4 288 aaPredicted RBP13.15□□□□□ -0.3
SPIN3-230ENST00000639888 CCDC34Q96HJ3 373 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 SLC26A8Q96RN1 970 aa13.15□□□□□ -0.3
SPIN3-230ENST00000639888 SKILP12757 684 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 FAM193AP78312 1265 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 NUCB1Q02818 461 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 CREBRFQ8IUR6 639 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 PYCARDQ9ULZ3 195 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 PDLIM2Q96JY6 352 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 A0A1B0GUL7 405 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 CAPN2P17655 700 aa13.14□□□□□ -0.31
SPIN3-230ENST00000639888 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
SPIN3-230ENST00000639888 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
SPIN3-230ENST00000639888 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
SPIN3-230ENST00000639888 ADAMTS12P58397 1594 aa13.13□□□□□ -0.31
SPIN3-230ENST00000639888 ZNF165P49910 485 aa13.13□□□□□ -0.31
SPIN3-230ENST00000639888 UBE2HP62256 183 aa13.13□□□□□ -0.31
SPIN3-230ENST00000639888 KIF21AQ7Z4S6 1674 aa13.13□□□□□ -0.31
SPIN3-230ENST00000639888 MAGI1Q96QZ7 1491 aaPredicted RBP13.13□□□□□ -0.31
SPIN3-230ENST00000639888 LOC102724159A0A0B4J2E5 919 aa13.13□□□□□ -0.31
SPIN3-230ENST00000639888 NAA30Q147X3 362 aaPredicted RBP13.13□□□□□ -0.31
SPIN3-230ENST00000639888 PWP2Q15269 919 aaKnown RBP13.13□□□□□ -0.31
SPIN3-230ENST00000639888 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.13□□□□□ -0.31
SPIN3-230ENST00000639888 ZSCAN26Q16670 478 aa13.12□□□□□ -0.31
SPIN3-230ENST00000639888 ZNF215Q9UL58 517 aaPredicted RBP13.12□□□□□ -0.31
SPIN3-230ENST00000639888 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
SPIN3-230ENST00000639888 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
SPIN3-230ENST00000639888 MICALL1Q8N3F8 863 aa13.12□□□□□ -0.31
SPIN3-230ENST00000639888 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
SPIN3-230ENST00000639888 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
SPIN3-230ENST00000639888 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
SPIN3-230ENST00000639888 MCM6Q14566 821 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 LARP1BQ659C4 914 aaKnown RBP13.11□□□□□ -0.31
SPIN3-230ENST00000639888 CCDC91Q7Z6B0 441 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 RAPGEF6Q8TEU7 1601 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 ZSWIM4Q9H7M6 989 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 TRAK1Q9UPV9 953 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 KINO60870 393 aaKnown RBP13.11□□□□□ -0.31
SPIN3-230ENST00000639888 ZKSCAN1P17029 563 aaPredicted RBP13.11□□□□□ -0.31
SPIN3-230ENST00000639888 LRMPQ12912 555 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 LUZP1Q86V48 1076 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 FAM200AQ8TCP9 573 aa13.11□□□□□ -0.31
SPIN3-230ENST00000639888 SFPQP23246 707 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPIN3-230ENST00000639888 ERO1AQ96HE7 468 aa13.1□□□□□ -0.31
SPIN3-230ENST00000639888 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
SPIN3-230ENST00000639888 IBTKQ9P2D0 1353 aaPredicted RBP13.1□□□□□ -0.31
SPIN3-230ENST00000639888 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
SPIN3-230ENST00000639888 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
SPIN3-230ENST00000639888 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
SPIN3-230ENST00000639888 ERLIN1O75477 346 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 ANKRD20A12PQ8NF67 263 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 EFCC1Q9HA90 598 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 ARFGAP3Q9NP61 516 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 NSFL1CQ9UNZ2 370 aaKnown RBP13.09□□□□□ -0.31
SPIN3-230ENST00000639888 KDM6BO15054 1643 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 ARHGAP5Q13017 1502 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 IVLP07476 585 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 TPM1P09493 284 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 NCBP1Q09161 790 aaKnown RBP13.09□□□□□ -0.31
SPIN3-230ENST00000639888 E2F4Q16254 413 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 DNAI1Q9UI46 699 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
SPIN3-230ENST00000639888 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 CCP110O43303 1012 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 CASTP20810 708 aaKnown RBP13.09□□□□□ -0.31
SPIN3-230ENST00000639888 GGT6Q6P531 493 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 ERBINQ96RT1 1412 aa13.09□□□□□ -0.31
SPIN3-230ENST00000639888 ANO6Q4KMQ2 910 aa13.08□□□□□ -0.31
SPIN3-230ENST00000639888 KIAA1524Q8TCG1 905 aa13.08□□□□□ -0.31
SPIN3-230ENST00000639888 ERCC4Q92889 916 aaPredicted RBP13.08□□□□□ -0.31
SPIN3-230ENST00000639888 TFIP11Q9UBB9 837 aaKnown RBP13.08□□□□□ -0.31
SPIN3-230ENST00000639888 SYTL4Q96C24 671 aaPredicted RBP13.08□□□□□ -0.32
SPIN3-230ENST00000639888 CASQ1P31415 396 aa13.08□□□□□ -0.32
SPIN3-230ENST00000639888 PHACTR2O75167 634 aa13.08□□□□□ -0.32
SPIN3-230ENST00000639888 CDR1P51861 262 aa13.08□□□□□ -0.32
SPIN3-230ENST00000639888 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
SPIN3-230ENST00000639888 TEX14Q8IWB6 1497 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 NEMFO60524 1076 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 CT47B1P0C2W7 299 aaPredicted RBP13.07□□□□□ -0.32
SPIN3-230ENST00000639888 SYT10Q6XYQ8 523 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 PZPP20742 1482 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 STX6O43752 255 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 ERCC6LQ2NKX8 1250 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 CTNNA3Q9UI47 895 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 RAD51AP2Q09MP3 1159 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 VPS18Q9P253 973 aa13.07□□□□□ -0.32
SPIN3-230ENST00000639888 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
SPIN3-230ENST00000639888 PDCP20941 246 aa13.06□□□□□ -0.32
SPIN3-230ENST00000639888 RUFY1Q96T51 708 aa13.06□□□□□ -0.32
SPIN3-230ENST00000639888 SRRTQ9BXP5 876 aaKnown RBP13.06□□□□□ -0.32
SPIN3-230ENST00000639888 JAKMIP3Q5VZ66 844 aa13.06□□□□□ -0.32
SPIN3-230ENST00000639888 DDX54Q8TDD1 881 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms