RNA–Protein interactions for RNA: ENST00000638999.1

KCNMA1-249, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,527 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-249ENST00000638999 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
KCNMA1-249ENST00000638999 TNNQ9UQP3 1299 aa13.62□□□□□ -0.23
KCNMA1-249ENST00000638999 COG6Q9Y2V7 657 aa13.62□□□□□ -0.23
KCNMA1-249ENST00000638999 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
KCNMA1-249ENST00000638999 TSPYL6Q8N831 410 aa13.61□□□□□ -0.23
KCNMA1-249ENST00000638999 PHRF1Q9P1Y6 1649 aaKnown RBP13.61□□□□□ -0.23
KCNMA1-249ENST00000638999 CHRNA2Q15822 529 aa13.61□□□□□ -0.23
KCNMA1-249ENST00000638999 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
KCNMA1-249ENST00000638999 HAP1P54257 671 aaPredicted RBP13.6□□□□□ -0.23
KCNMA1-249ENST00000638999 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
KCNMA1-249ENST00000638999 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
KCNMA1-249ENST00000638999 FTSJ3Q8IY81 847 aaKnown RBP13.6□□□□□ -0.23
KCNMA1-249ENST00000638999 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
KCNMA1-249ENST00000638999 RGPD5Q99666 1765 aa13.6□□□□□ -0.23
KCNMA1-249ENST00000638999 TCERG1O14776 1098 aaKnown RBP13.59□□□□□ -0.23
KCNMA1-249ENST00000638999 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
KCNMA1-249ENST00000638999 CSB-PGBD3P0DP91 1061 aa13.59□□□□□ -0.23
KCNMA1-249ENST00000638999 RLBP1P12271 317 aa13.59□□□□□ -0.23
KCNMA1-249ENST00000638999 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
KCNMA1-249ENST00000638999 MAP3K5Q99683 1374 aa13.58□□□□□ -0.23
KCNMA1-249ENST00000638999 VAMP4O75379 141 aa13.58□□□□□ -0.23
KCNMA1-249ENST00000638999 NLRP2Q9NX02 1062 aa13.58□□□□□ -0.23
KCNMA1-249ENST00000638999 TSPYL4Q9UJ04 414 aa13.58□□□□□ -0.24
KCNMA1-249ENST00000638999 ERBB3P21860 1342 aa13.58□□□□□ -0.24
KCNMA1-249ENST00000638999 SOS2Q07890 1332 aaPredicted RBP13.58□□□□□ -0.24
KCNMA1-249ENST00000638999 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
KCNMA1-249ENST00000638999 CHL1O00533 1208 aa13.57□□□□□ -0.24
KCNMA1-249ENST00000638999 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
KCNMA1-249ENST00000638999 ALDH1L2Q3SY69 923 aa13.57□□□□□ -0.24
KCNMA1-249ENST00000638999 CRB1P82279 1406 aa13.57□□□□□ -0.24
KCNMA1-249ENST00000638999 DZIP1LQ8IYY4 767 aaKnown RBP13.57□□□□□ -0.24
KCNMA1-249ENST00000638999 HTATSF1O43719 755 aaKnown RBP13.56□□□□□ -0.24
KCNMA1-249ENST00000638999 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
KCNMA1-249ENST00000638999 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
KCNMA1-249ENST00000638999 TRIM27P14373 513 aa13.56□□□□□ -0.24
KCNMA1-249ENST00000638999 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
KCNMA1-249ENST00000638999 ZNF530Q6P9A1 599 aaPredicted RBP13.56□□□□□ -0.24
KCNMA1-249ENST00000638999 ATF7IPQ6VMQ6 1270 aa13.56□□□□□ -0.24
KCNMA1-249ENST00000638999 ZNF428Q96B54 188 aa13.56□□□□□ -0.24
KCNMA1-249ENST00000638999 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
KCNMA1-249ENST00000638999 IL17REQ8NFR9 667 aa13.55□□□□□ -0.24
KCNMA1-249ENST00000638999 MS4A1P11836 297 aa13.55□□□□□ -0.24
KCNMA1-249ENST00000638999 PRDM11Q9NQV5 511 aa13.55□□□□□ -0.24
KCNMA1-249ENST00000638999 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
KCNMA1-249ENST00000638999 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
KCNMA1-249ENST00000638999 CRYBG1Q9Y4K1 1723 aa13.53□□□□□ -0.24
KCNMA1-249ENST00000638999 NBR1Q14596 966 aa13.53□□□□□ -0.24
KCNMA1-249ENST00000638999 AMOTQ4VCS5 1084 aa13.53□□□□□ -0.24
KCNMA1-249ENST00000638999 SKAP1Q86WV1 359 aa13.53□□□□□ -0.24
KCNMA1-249ENST00000638999 MRPL50Q8N5N7 158 aaKnown RBP13.53□□□□□ -0.24
KCNMA1-249ENST00000638999 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
KCNMA1-249ENST00000638999 MVPQ14764 893 aaKnown RBP13.53□□□□□ -0.24
KCNMA1-249ENST00000638999 LGR6Q9HBX8 967 aa13.52□□□□□ -0.24
KCNMA1-249ENST00000638999 NOP58Q9Y2X3 529 aaKnown RBP13.52□□□□□ -0.24
KCNMA1-249ENST00000638999 COL18A1P39060 1754 aa13.52□□□□□ -0.25
KCNMA1-249ENST00000638999 CPDO75976 1380 aa13.52□□□□□ -0.25
KCNMA1-249ENST00000638999 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.25
KCNMA1-249ENST00000638999 MPRIPQ6WCQ1 1025 aa13.52□□□□□ -0.25
KCNMA1-249ENST00000638999 TAF7Q15545 349 aaPredicted RBP13.51□□□□□ -0.25
KCNMA1-249ENST00000638999 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
KCNMA1-249ENST00000638999 NCAPD2Q15021 1401 aa13.51□□□□□ -0.25
KCNMA1-249ENST00000638999 TMEM57Q8N5G2 664 aa13.51□□□□□ -0.25
KCNMA1-249ENST00000638999 TATP17735 454 aaPredicted RBP13.5□□□□□ -0.25
KCNMA1-249ENST00000638999 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
KCNMA1-249ENST00000638999 LRRC37A3O60309 1634 aa13.5□□□□□ -0.25
KCNMA1-249ENST00000638999 CAMTA1Q9Y6Y1 1673 aa13.5□□□□□ -0.25
KCNMA1-249ENST00000638999 TEFQ10587 303 aa13.5□□□□□ -0.25
KCNMA1-249ENST00000638999 BRPF1P55201 1214 aaPredicted RBP13.49□□□□□ -0.25
KCNMA1-249ENST00000638999 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
KCNMA1-249ENST00000638999 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
KCNMA1-249ENST00000638999 LTBP4Q8N2S1 1624 aa13.48□□□□□ -0.25
KCNMA1-249ENST00000638999 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
KCNMA1-249ENST00000638999 NECTIN2Q92692 538 aa13.48□□□□□ -0.25
KCNMA1-249ENST00000638999 STRN4Q9NRL3 753 aa13.48□□□□□ -0.25
KCNMA1-249ENST00000638999 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
KCNMA1-249ENST00000638999 IGHDP01880 384 aa13.48□□□□□ -0.25
KCNMA1-249ENST00000638999 CEMIPQ8WUJ3 1361 aa13.48□□□□□ -0.25
KCNMA1-249ENST00000638999 RNMTO43148 476 aaKnown RBP13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 LMO7Q8WWI1 1683 aa13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 ABCC6O95255 1503 aa13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 DEKP35659 375 aaKnown RBP13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 EVA1CP58658 441 aa13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 ARHGAP45Q92619 1136 aa13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 SPG7Q9UQ90 795 aa13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 PCDHB15Q9Y5E8 787 aa13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
KCNMA1-249ENST00000638999 MEGF6O75095 1541 aa13.46□□□□□ -0.25
KCNMA1-249ENST00000638999 BTBD11A6QL63 1104 aa13.46□□□□□ -0.25
KCNMA1-249ENST00000638999 AAMPQ13685 434 aa13.46□□□□□ -0.25
KCNMA1-249ENST00000638999 PIP4K2BP78356 416 aa13.46□□□□□ -0.26
KCNMA1-249ENST00000638999 API5Q9BZZ5 524 aaKnown RBP13.46□□□□□ -0.26
KCNMA1-249ENST00000638999 FAM208AQ9UK61 1670 aaKnown RBP13.46□□□□□ -0.26
KCNMA1-249ENST00000638999 BABAM1Q9NWV8 329 aa13.45□□□□□ -0.26
KCNMA1-249ENST00000638999 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
KCNMA1-249ENST00000638999 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
KCNMA1-249ENST00000638999 STK31Q9BXU1 1019 aa13.45□□□□□ -0.26
KCNMA1-249ENST00000638999 KCNQ3O43525 872 aa13.44□□□□□ -0.26
KCNMA1-249ENST00000638999 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-249ENST00000638999 COL5A2P05997 1499 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms