RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-225ENST00000637911 A0A0G2JLL6 359 aaPredicted RBP0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 PLEKHG3A1L390 1219 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 MEGF11A6BM72 1044 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 ANKRD33BA6NCL7 494 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 CYR61O00622 381 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 NFIBO00712 420 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 SIAH2O43255 324 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 TGFB1P01137 390 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 SLPIP03973 132 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 TIMP2P16035 220 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 HOXB4P17483 251 aaPredicted RBP0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 BMP7P18075 431 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 DGKGP49619 791 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 WNT7BP56706 349 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 KRTAP10-11P60412 298 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 NRG1Q02297 640 aaPredicted RBP0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 NNTQ13423 1086 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 KMT5BQ4FZB7 885 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 ZNF362Q5T0B9 420 aaPredicted RBP0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 LCE3AQ5TA76 89 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 CBLL1Q75N03 491 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 DTX1Q86Y01 620 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 SCUBE1Q8IWY4 988 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 TP53INP2Q8IXH6 220 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 UPF1Q92900 1129 aaKnown RBP eCLIP0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 FBXW7Q969H0 707 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 GMCL1Q96IK5 515 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 CRAMP1Q96RY5 1269 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 SEMA6CQ9H3T2 930 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 KCNK12Q9HB15 430 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 DLL4Q9NR61 685 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 PHF8Q9UPP1 1060 aa0.27□□□□□ -2.37
SYNGAP1-225ENST00000637911 LRRC10BA6NIK2 292 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 NPIPB6E9PJ23 425 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 ZIC2O95409 532 aaPredicted RBP0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 CHRM1P11229 460 aaPredicted RBP0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 TNFRSF1AP19438 455 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 INHBEP58166 350 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 NLRP6P59044 892 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 MESP2Q0VG99 397 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 ADGRE1Q14246 886 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 MBTPS1Q14703 1052 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 GRIK4Q16099 956 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 BSPRYQ5W0U4 402 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 TYW1BQ6NUM6 668 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 C1orf229Q6ZS94 237 aaPredicted RBP0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 SCUBE3Q8IX30 993 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 TMEM40Q8WWA1 233 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 GTPBP3Q969Y2 492 aaKnown RBP0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 SHISA4Q96DD7 197 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 KLRG1Q96E93 195 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 TRIM11Q96F44 468 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 FBXL18Q96ME1 805 aa0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 TSEN34Q9BSV6 310 aaKnown RBP0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP0.26□□□□□ -2.37
SYNGAP1-225ENST00000637911 PCSK5Q92824 1860 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 NBPF26B4DH59 902 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 FAM229AH3BQW9 127 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 PAPLNO95428 1278 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 C6P13671 934 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 FUT4P22083 530 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 IL12RB1P42701 662 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 SKOR1P84550 965 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 PLP2Q04941 152 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 GSE1Q14687 1217 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 C6orf132Q5T0Z8 1188 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 SWT1Q5T5J6 900 aaKnown RBP0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 GDF6Q6KF10 455 aaPredicted RBP0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 PRR23CQ6ZRP0 262 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 RIPOR1Q6ZS17 1223 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 SYDE1Q6ZW31 735 aaPredicted RBP0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 OXER1Q8TDS5 423 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 FAM168AQ92567 244 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 TATDN2Q93075 761 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 VOPP1Q96AW1 172 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 ZNF837Q96EG3 531 aaPredicted RBP0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 HHIPQ96QV1 700 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 ZFAND3Q9H8U3 227 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 RTEL1Q9NZ71 1219 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 TSKSQ9UJT2 592 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 USP21Q9UK80 565 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 PNMA3Q9UL41 463 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 HRH3Q9Y5N1 445 aa0.25□□□□□ -2.37
SYNGAP1-225ENST00000637911 CARMIL2Q6F5E8 1435 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 PITPNM2Q9BZ72 1349 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 H7C1W4 665 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 MATN3O15232 486 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 ACTN4O43707 911 aaKnown RBP0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 NUAK1O60285 661 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 EVI5O60447 810 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 CFHP08603 1231 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 EPXP11678 715 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 KRTAP10-1P60331 282 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 KRTAP10-12P60413 245 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 FOXK1P85037 733 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 EFEMP1Q12805 493 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 MLANAQ16655 118 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 LCE1CQ5T751 118 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 LCE1BQ5T7P3 118 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 PTCRAQ6ISU1 281 aaPredicted RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms