RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 PRKRIP1Q9H875 184 aaPredicted RBP12.3□□□□□ -0.44
CACNA1A-239ENST00000637297 SPG7Q9UQ90 795 aa12.3□□□□□ -0.44
CACNA1A-239ENST00000637297 MYBBP1AQ9BQG0 1328 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-239ENST00000637297 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
CACNA1A-239ENST00000637297 HMOX1P09601 288 aa12.29□□□□□ -0.44
CACNA1A-239ENST00000637297 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
CACNA1A-239ENST00000637297 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-239ENST00000637297 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNA1A-239ENST00000637297 OVOS2A0A0G2JMS6 1433 aa12.28□□□□□ -0.44
CACNA1A-239ENST00000637297 MEGF6O75095 1541 aa12.28□□□□□ -0.44
CACNA1A-239ENST00000637297 PLEKHO1Q53GL0 409 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-239ENST00000637297 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-239ENST00000637297 TRIM37O94972 964 aa12.27□□□□□ -0.45
CACNA1A-239ENST00000637297 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-239ENST00000637297 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.45
CACNA1A-239ENST00000637297 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.45
CACNA1A-239ENST00000637297 PCDH11XQ9BZA7 1347 aa12.27□□□□□ -0.45
CACNA1A-239ENST00000637297 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.45
CACNA1A-239ENST00000637297 RGPD1P0DJD0 1748 aa12.26□□□□□ -0.45
CACNA1A-239ENST00000637297 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
CACNA1A-239ENST00000637297 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
CACNA1A-239ENST00000637297 NEFMP07197 916 aa12.26□□□□□ -0.45
CACNA1A-239ENST00000637297 AMOTQ4VCS5 1084 aa12.26□□□□□ -0.45
CACNA1A-239ENST00000637297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.45
CACNA1A-239ENST00000637297 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
CACNA1A-239ENST00000637297 COL3A1P02461 1466 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-239ENST00000637297 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
CACNA1A-239ENST00000637297 IFNL2Q8IZJ0 200 aa12.25□□□□□ -0.45
CACNA1A-239ENST00000637297 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
CACNA1A-239ENST00000637297 APBA3O96018 575 aa12.24□□□□□ -0.45
CACNA1A-239ENST00000637297 KDRP35968 1356 aa12.24□□□□□ -0.45
CACNA1A-239ENST00000637297 BAG6P46379 1132 aa12.24□□□□□ -0.45
CACNA1A-239ENST00000637297 ZNF530Q6P9A1 599 aaPredicted RBP12.24□□□□□ -0.45
CACNA1A-239ENST00000637297 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
CACNA1A-239ENST00000637297 SYTL4Q96C24 671 aaPredicted RBP12.24□□□□□ -0.45
CACNA1A-239ENST00000637297 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
CACNA1A-239ENST00000637297 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
CACNA1A-239ENST00000637297 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
CACNA1A-239ENST00000637297 PLEKHG2Q9H7P9 1386 aa12.22□□□□□ -0.45
CACNA1A-239ENST00000637297 CYP27B1O15528 508 aa12.22□□□□□ -0.45
CACNA1A-239ENST00000637297 FCHSD2O94868 740 aa12.22□□□□□ -0.45
CACNA1A-239ENST00000637297 HSP90AB1P08238 724 aaKnown RBP12.22□□□□□ -0.45
CACNA1A-239ENST00000637297 PRKAR2BP31323 418 aa12.22□□□□□ -0.45
CACNA1A-239ENST00000637297 BCL11BQ9C0K0 894 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-239ENST00000637297 BCL9O00512 1426 aa12.21□□□□□ -0.45
CACNA1A-239ENST00000637297 PHKG2P15735 406 aa12.21□□□□□ -0.45
CACNA1A-239ENST00000637297 DOT1LQ8TEK3 1739 aa12.2□□□□□ -0.46
CACNA1A-239ENST00000637297 KCNQ2O43526 872 aa12.2□□□□□ -0.46
CACNA1A-239ENST00000637297 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-239ENST00000637297 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
CACNA1A-239ENST00000637297 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
CACNA1A-239ENST00000637297 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
CACNA1A-239ENST00000637297 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-239ENST00000637297 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-239ENST00000637297 MTHFSDQ2M296 383 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-239ENST00000637297 AKAP4Q5JQC9 854 aa12.19□□□□□ -0.46
CACNA1A-239ENST00000637297 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
CACNA1A-239ENST00000637297 TNS1Q9HBL0 1735 aaKnown RBP12.19□□□□□ -0.46
CACNA1A-239ENST00000637297 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
CACNA1A-239ENST00000637297 ITGB4P16144 1822 aa12.18□□□□□ -0.46
CACNA1A-239ENST00000637297 VIRMAQ69YN4 1812 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-239ENST00000637297 MAPK8IP3Q9UPT6 1336 aa12.18□□□□□ -0.46
CACNA1A-239ENST00000637297 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
CACNA1A-239ENST00000637297 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
CACNA1A-239ENST00000637297 BTAF1O14981 1849 aa12.18□□□□□ -0.46
CACNA1A-239ENST00000637297 CABP4P57796 275 aa12.17□□□□□ -0.46
CACNA1A-239ENST00000637297 PTF1AQ7RTS3 328 aa12.17□□□□□ -0.46
CACNA1A-239ENST00000637297 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
CACNA1A-239ENST00000637297 GNAT3A8MTJ3 354 aa12.16□□□□□ -0.46
CACNA1A-239ENST00000637297 ERVV-2B6SEH9 535 aa12.16□□□□□ -0.46
CACNA1A-239ENST00000637297 PLSCR1O15162 318 aa12.16□□□□□ -0.46
CACNA1A-239ENST00000637297 EZH2Q15910 746 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-239ENST00000637297 RTF1Q92541 710 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-239ENST00000637297 PHACTR3Q96KR7 559 aa12.16□□□□□ -0.46
CACNA1A-239ENST00000637297 SCN11AQ9UI33 1791 aa12.15□□□□□ -0.46
CACNA1A-239ENST00000637297 ADAMTS8Q9UP79 889 aa12.15□□□□□ -0.46
CACNA1A-239ENST00000637297 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-239ENST00000637297 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
CACNA1A-239ENST00000637297 SMARCC1Q92922 1105 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-239ENST00000637297 CAMKK2Q96RR4 588 aa12.14□□□□□ -0.47
CACNA1A-239ENST00000637297 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
CACNA1A-239ENST00000637297 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
CACNA1A-239ENST00000637297 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
CACNA1A-239ENST00000637297 CCDC184Q52MB2 194 aa12.13□□□□□ -0.47
CACNA1A-239ENST00000637297 NFATC2IPQ8NCF5 419 aa12.13□□□□□ -0.47
CACNA1A-239ENST00000637297 PIGBQ92521 554 aa12.13□□□□□ -0.47
CACNA1A-239ENST00000637297 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
CACNA1A-239ENST00000637297 PLEKHF1Q96S99 279 aa12.13□□□□□ -0.47
CACNA1A-239ENST00000637297 LGR6Q9HBX8 967 aa12.13□□□□□ -0.47
CACNA1A-239ENST00000637297 EP400Q96L91 3159 aa12.12□□□□□ -0.47
CACNA1A-239ENST00000637297 TEFQ10587 303 aa12.12□□□□□ -0.47
CACNA1A-239ENST00000637297 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
CACNA1A-239ENST00000637297 NBPF14Q5TI25 921 aa12.12□□□□□ -0.47
CACNA1A-239ENST00000637297 RGPD3A6NKT7 1758 aaPredicted RBP12.12□□□□□ -0.47
CACNA1A-239ENST00000637297 RGPD4Q7Z3J3 1758 aa12.12□□□□□ -0.47
CACNA1A-239ENST00000637297 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-239ENST00000637297 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
CACNA1A-239ENST00000637297 RIPK4P57078 832 aa12.11□□□□□ -0.47
CACNA1A-239ENST00000637297 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
CACNA1A-239ENST00000637297 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms