RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 MX2P20592 715 aa4.33□□□□□ -1.72
SCN1A-215ENST00000637285 SNRPNP63162 240 aaKnown RBP4.33□□□□□ -1.72
SCN1A-215ENST00000637285 CTDSPL2Q05D32 466 aa4.33□□□□□ -1.72
SCN1A-215ENST00000637285 GMCL1Q96IK5 515 aa4.33□□□□□ -1.72
SCN1A-215ENST00000637285 GAS2L1Q99501 681 aaPredicted RBP4.33□□□□□ -1.72
SCN1A-215ENST00000637285 FKBPLQ9UIM3 349 aa4.33□□□□□ -1.72
SCN1A-215ENST00000637285 ERVH48-1M5A8F1 160 aa4.32□□□□□ -1.72
SCN1A-215ENST00000637285 LILRA1O75019 489 aa4.32□□□□□ -1.72
SCN1A-215ENST00000637285 ZMYND10O75800 440 aa4.32□□□□□ -1.72
SCN1A-215ENST00000637285 KDF1Q8NAX2 398 aaPredicted RBP4.32□□□□□ -1.72
SCN1A-215ENST00000637285 RRAGCQ9HB90 399 aa4.32□□□□□ -1.72
SCN1A-215ENST00000637285 NSFL1CQ9UNZ2 370 aaKnown RBP4.32□□□□□ -1.72
SCN1A-215ENST00000637285 H7C1W4 665 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 MEN1O00255 615 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 OIP5O43482 229 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 RNF144AP50876 292 aaPredicted RBP4.31□□□□□ -1.72
SCN1A-215ENST00000637285 PTK2Q05397 1052 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 NR6A1Q15406 480 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 TUSC1Q2TAM9 212 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 NBPF20Q3BBV1 942 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 ADAM32Q8TC27 787 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 LRRN4Q8WUT4 740 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 CYLDQ9NQC7 956 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 MKL2Q9ULH7 1088 aa4.31□□□□□ -1.72
SCN1A-215ENST00000637285 TRIM66O15016 1216 aa4.3□□□□□ -1.72
SCN1A-215ENST00000637285 COL8A1P27658 744 aa4.3□□□□□ -1.72
SCN1A-215ENST00000637285 POU4F2Q12837 409 aa4.3□□□□□ -1.72
SCN1A-215ENST00000637285 GRIN2CQ14957 1233 aa4.3□□□□□ -1.72
SCN1A-215ENST00000637285 DZIP3Q86Y13 1208 aaKnown RBP4.3□□□□□ -1.72
SCN1A-215ENST00000637285 OCSTAMPQ9BR26 566 aa4.3□□□□□ -1.72
SCN1A-215ENST00000637285 OXCT2Q9BYC2 517 aaPredicted RBP4.3□□□□□ -1.72
SCN1A-215ENST00000637285 POLR3EQ9NVU0 708 aa4.3□□□□□ -1.72
SCN1A-215ENST00000637285 SHISA8B8ZZ34 492 aa4.29□□□□□ -1.72
SCN1A-215ENST00000637285 CLK2P49760 499 aaKnown RBP4.29□□□□□ -1.72
SCN1A-215ENST00000637285 ZC3H15Q8WU90 426 aaKnown RBP4.29□□□□□ -1.72
SCN1A-215ENST00000637285 LRRC4BQ9NT99 713 aa4.29□□□□□ -1.72
SCN1A-215ENST00000637285 DYRK1BQ9Y463 629 aa4.29□□□□□ -1.72
SCN1A-215ENST00000637285 ZC3H4Q9UPT8 1303 aaKnown RBP4.28□□□□□ -1.72
SCN1A-215ENST00000637285 ATP5J2-PTCD1G3V325 749 aa4.28□□□□□ -1.72
SCN1A-215ENST00000637285 AMPD1P23109 780 aa4.28□□□□□ -1.72
SCN1A-215ENST00000637285 MAP2K3P46734 347 aa4.28□□□□□ -1.72
SCN1A-215ENST00000637285 SLC27A3Q5K4L6 730 aa4.28□□□□□ -1.72
SCN1A-215ENST00000637285 KRTAP1-3Q8IUG1 177 aa4.28□□□□□ -1.72
SCN1A-215ENST00000637285 NUCKS1Q9H1E3 243 aaKnown RBP4.28□□□□□ -1.72
SCN1A-215ENST00000637285 C1QTNF9BB2RNN3 333 aa4.27□□□□□ -1.73
SCN1A-215ENST00000637285 C1orf229Q6ZS94 237 aaPredicted RBP4.27□□□□□ -1.73
SCN1A-215ENST00000637285 ALYREFQ86V81 257 aaKnown RBP4.27□□□□□ -1.73
SCN1A-215ENST00000637285 EDARADDQ8WWZ3 215 aa4.27□□□□□ -1.73
SCN1A-215ENST00000637285 KLRG1Q96E93 195 aa4.27□□□□□ -1.73
SCN1A-215ENST00000637285 SEMA6BQ9H3T3 888 aa4.27□□□□□ -1.73
SCN1A-215ENST00000637285 SUV39H2Q9H5I1 410 aa4.27□□□□□ -1.73
SCN1A-215ENST00000637285 GPSM3Q9Y4H4 160 aa4.27□□□□□ -1.73
SCN1A-215ENST00000637285 A0A1W2PRU2 124 aa4.26□□□□□ -1.73
SCN1A-215ENST00000637285 GPC1P35052 558 aa4.26□□□□□ -1.73
SCN1A-215ENST00000637285 ZMYM1Q5SVZ6 1142 aa4.26□□□□□ -1.73
SCN1A-215ENST00000637285 NBPF10Q6P3W6 841 aaKnown RBP4.26□□□□□ -1.73
SCN1A-215ENST00000637285 NBPF15Q8N660 670 aa4.26□□□□□ -1.73
SCN1A-215ENST00000637285 AK7Q96M32 723 aa4.26□□□□□ -1.73
SCN1A-215ENST00000637285 NLRP3Q96P20 1036 aa4.26□□□□□ -1.73
SCN1A-215ENST00000637285 TIMMDC1Q9NPL8 285 aa4.26□□□□□ -1.73
SCN1A-215ENST00000637285 ESPNB1AK53 854 aa4.25□□□□□ -1.73
SCN1A-215ENST00000637285 F11P03951 625 aa4.25□□□□□ -1.73
SCN1A-215ENST00000637285 DOC2BQ14184 412 aa4.25□□□□□ -1.73
SCN1A-215ENST00000637285 CD163Q86VB7 1156 aa4.25□□□□□ -1.73
SCN1A-215ENST00000637285 GPAMQ9HCL2 828 aa4.25□□□□□ -1.73
SCN1A-215ENST00000637285 ATP1B4Q9UN42 357 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-215ENST00000637285 SCO2A0A1W2PP80 73 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 ITGB7P26010 798 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 PDE4DQ08499 809 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 PPP2R2DQ66LE6 453 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 LINC00114Q6XXX2 140 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 PNMA1Q8ND90 353 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 EPS8L1Q8TE68 723 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 TRIM52Q96A61 297 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 CFHR5Q9BXR6 569 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 RSPH6AQ9H0K4 717 aa4.24□□□□□ -1.73
SCN1A-215ENST00000637285 GDF2Q9UK05 429 aaPredicted RBP4.24□□□□□ -1.73
SCN1A-215ENST00000637285 AP1G2O75843 785 aa4.23□□□□□ -1.73
SCN1A-215ENST00000637285 BMP4P12644 408 aa4.23□□□□□ -1.73
SCN1A-215ENST00000637285 CHRNA4P43681 627 aa4.23□□□□□ -1.73
SCN1A-215ENST00000637285 TAS1R3Q7RTX0 852 aa4.23□□□□□ -1.73
SCN1A-215ENST00000637285 SEPT12Q8IYM1 358 aa4.23□□□□□ -1.73
SCN1A-215ENST00000637285 GOLGA6L1Q8N7Z2 621 aa4.23□□□□□ -1.73
SCN1A-215ENST00000637285 GRIP2Q9C0E4 1043 aa4.23□□□□□ -1.73
SCN1A-215ENST00000637285 PHF24Q9UPV7 400 aa4.23□□□□□ -1.73
SCN1A-215ENST00000637285 WASLO00401 505 aaPredicted RBP4.22□□□□□ -1.73
SCN1A-215ENST00000637285 PIK3R2O00459 728 aa4.22□□□□□ -1.73
SCN1A-215ENST00000637285 GNB5O14775 395 aa4.22□□□□□ -1.73
SCN1A-215ENST00000637285 GIGYF1O75420 1035 aaPredicted RBP4.22□□□□□ -1.73
SCN1A-215ENST00000637285 THBS1P07996 1170 aa4.22□□□□□ -1.73
SCN1A-215ENST00000637285 PHKA2P46019 1235 aa4.22□□□□□ -1.73
SCN1A-215ENST00000637285 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
SCN1A-215ENST00000637285 VSIG10Q8N0Z9 540 aa4.22□□□□□ -1.73
SCN1A-215ENST00000637285 GGA1Q9UJY5 639 aa4.22□□□□□ -1.73
SCN1A-215ENST00000637285 SPATA31C2B4DYI2 1134 aa4.21□□□□□ -1.74
SCN1A-215ENST00000637285 HOXB4P17483 251 aaPredicted RBP4.21□□□□□ -1.74
SCN1A-215ENST00000637285 CLN3Q13286 438 aa4.21□□□□□ -1.74
SCN1A-215ENST00000637285 WDR44Q5JSH3 913 aa4.21□□□□□ -1.74
SCN1A-215ENST00000637285 FBXO31Q5XUX0 539 aaPredicted RBP4.21□□□□□ -1.74
SCN1A-215ENST00000637285 CC2D2BQ6DHV5 1058 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms