RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 LILRA1O75019 489 aa3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 ADD1P35611 737 aaKnown RBP3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 BAG6P46379 1132 aa3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 CLK2P49760 499 aaKnown RBP3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 SNRPNP63162 240 aaKnown RBP3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 NR6A1Q15406 480 aa3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 DBN1Q16643 649 aa3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 NBPF20Q3BBV1 942 aa3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 KDF1Q8NAX2 398 aaPredicted RBP3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 ADAM32Q8TC27 787 aa3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 ZC3H15Q8WU90 426 aaKnown RBP3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 TRERF1Q96PN7 1200 aa3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 PSMG3-AS1Q96PY0 264 aa3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 GAS2L1Q99501 681 aaPredicted RBP3.13□□□□□ -1.91
SMARCB1-209ENST00000635578 KRBA1A5PL33 1030 aa3.12□□□□□ -1.91
SMARCB1-209ENST00000635578 MX2P20592 715 aa3.12□□□□□ -1.91
SMARCB1-209ENST00000635578 PTK2Q05397 1052 aa3.12□□□□□ -1.91
SMARCB1-209ENST00000635578 OCSTAMPQ9BR26 566 aa3.12□□□□□ -1.91
SMARCB1-209ENST00000635578 RRAGCQ9HB90 399 aa3.12□□□□□ -1.91
SMARCB1-209ENST00000635578 ATP1B4Q9UN42 357 aaPredicted RBP3.12□□□□□ -1.91
SMARCB1-209ENST00000635578 RNF144AP50876 292 aaPredicted RBP3.11□□□□□ -1.91
SMARCB1-209ENST00000635578 POU4F2Q12837 409 aa3.11□□□□□ -1.91
SMARCB1-209ENST00000635578 TUSC1Q2TAM9 212 aa3.11□□□□□ -1.91
SMARCB1-209ENST00000635578 SLC27A3Q5K4L6 730 aa3.11□□□□□ -1.91
SMARCB1-209ENST00000635578 DZIP3Q86Y13 1208 aaKnown RBP3.11□□□□□ -1.91
SMARCB1-209ENST00000635578 OXCT2Q9BYC2 517 aaPredicted RBP3.11□□□□□ -1.91
SMARCB1-209ENST00000635578 NSFL1CQ9UNZ2 370 aaKnown RBP3.11□□□□□ -1.91
SMARCB1-209ENST00000635578 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 SHISA8B8ZZ34 492 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 ATP5J2-PTCD1G3V325 749 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 H7C1W4 665 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 OIP5O43482 229 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 AMPD1P23109 780 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 COL8A1P27658 744 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 GRIN2CQ14957 1233 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 GMCL1Q96IK5 515 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 AK7Q96M32 723 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 GPAMQ9HCL2 828 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 MKL2Q9ULH7 1088 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 DYRK1BQ9Y463 629 aa3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 ZC3H4Q9UPT8 1303 aaKnown RBP3.1□□□□□ -1.91
SMARCB1-209ENST00000635578 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 A0A1W2PRU2 124 aa3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 AP1G2O75843 785 aa3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 PDE4DQ08499 809 aa3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 NBPF10Q6P3W6 841 aaKnown RBP3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 NBPF15Q8N660 670 aa3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 EPS8L1Q8TE68 723 aa3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 NLRP3Q96P20 1036 aa3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 NUCKS1Q9H1E3 243 aaKnown RBP3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 GPSM3Q9Y4H4 160 aa3.09□□□□□ -1.91
SMARCB1-209ENST00000635578 MAP2K3P46734 347 aa3.08□□□□□ -1.92
SMARCB1-209ENST00000635578 FBXO31Q5XUX0 539 aaPredicted RBP3.08□□□□□ -1.92
SMARCB1-209ENST00000635578 C1orf229Q6ZS94 237 aaPredicted RBP3.08□□□□□ -1.92
SMARCB1-209ENST00000635578 VSIG10Q8N0Z9 540 aa3.08□□□□□ -1.92
SMARCB1-209ENST00000635578 RSPH6AQ9H0K4 717 aa3.08□□□□□ -1.92
SMARCB1-209ENST00000635578 SUV39H2Q9H5I1 410 aa3.08□□□□□ -1.92
SMARCB1-209ENST00000635578 TIMMDC1Q9NPL8 285 aa3.08□□□□□ -1.92
SMARCB1-209ENST00000635578 ESPNB1AK53 854 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 C1QTNF9BB2RNN3 333 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 F11P03951 625 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 PHKA2P46019 1235 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 PNMA1Q8ND90 353 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 EDARADDQ8WWZ3 215 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 KLRG1Q96E93 195 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 SEMA6BQ9H3T3 888 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 HMX1Q9NP08 348 aaPredicted RBP3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 LRRC4BQ9NT99 713 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 PCDHB9Q9Y5E1 797 aa3.07□□□□□ -1.92
SMARCB1-209ENST00000635578 SCO2A0A1W2PP80 73 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 GIGYF1O75420 1035 aaPredicted RBP3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 BMP4P12644 408 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 GPC1P35052 558 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 CHRNA4P43681 627 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 DOC2BQ14184 412 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 ZMYM1Q5SVZ6 1142 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 TAS1R3Q7RTX0 852 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 CD163Q86VB7 1156 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 PROCA1Q8NCQ7 364 aaPredicted RBP3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 ARHGEF10LQ9HCE6 1279 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 RAB6BQ9NRW1 208 aa3.06□□□□□ -1.92
SMARCB1-209ENST00000635578 WASLO00401 505 aaPredicted RBP3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 THBS1P07996 1170 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 USP17L8P0C7I0 530 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 ITGB7P26010 798 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 SCTRP47872 440 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 CLN3Q13286 438 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 PPP2R2DQ66LE6 453 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 LINC00114Q6XXX2 140 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 CYP2U1Q7Z449 544 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 ALYREFQ86V81 257 aaKnown RBP3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 KRTAP1-3Q8IUG1 177 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 SEPT12Q8IYM1 358 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 ABHD17AQ96GS6 310 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 GRIP2Q9C0E4 1043 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 ESF1Q9H501 851 aaKnown RBP3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 RUBCNLQ9H714 662 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 GGA1Q9UJY5 639 aa3.05□□□□□ -1.92
SMARCB1-209ENST00000635578 GDF2Q9UK05 429 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms