RNA–Protein interactions for RNA: ENST00000635252.1

PRDM9-203, Transcript of PR/SET domain 9, humanhuman

TSL 5

Gene PRDM9, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-203ENST00000635252 PDE3BQ13370 1112 aa18.07■□□□□ 0.48
PRDM9-203ENST00000635252 MARCH10Q8NA82 808 aaPredicted RBP18.07■□□□□ 0.48
PRDM9-203ENST00000635252 KDRP35968 1356 aa18.06■□□□□ 0.48
PRDM9-203ENST00000635252 TNS2Q63HR2 1409 aa18.05■□□□□ 0.48
PRDM9-203ENST00000635252 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
PRDM9-203ENST00000635252 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
PRDM9-203ENST00000635252 ZCRB1Q8TBF4 217 aaKnown RBP18.04■□□□□ 0.48
PRDM9-203ENST00000635252 DDX54Q8TDD1 881 aaKnown RBP18.04■□□□□ 0.48
PRDM9-203ENST00000635252 SHANK3Q9BYB0 1731 aa18.04■□□□□ 0.48
PRDM9-203ENST00000635252 DIEXFQ68CQ4 756 aaKnown RBP18.03■□□□□ 0.48
PRDM9-203ENST00000635252 NUDCQ9Y266 331 aa18.03■□□□□ 0.48
PRDM9-203ENST00000635252 CYP27B1O15528 508 aa18.01■□□□□ 0.47
PRDM9-203ENST00000635252 PKD1L3Q7Z443 1732 aa18.01■□□□□ 0.47
PRDM9-203ENST00000635252 RSPH6AQ9H0K4 717 aa18■□□□□ 0.47
PRDM9-203ENST00000635252 PRKAR2BP31323 418 aa17.99■□□□□ 0.47
PRDM9-203ENST00000635252 PHACTR3Q96KR7 559 aa17.98■□□□□ 0.47
PRDM9-203ENST00000635252 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
PRDM9-203ENST00000635252 KAT6BQ8WYB5 2073 aa17.98■□□□□ 0.47
PRDM9-203ENST00000635252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRDM9-203ENST00000635252 PLEKHO1Q53GL0 409 aaPredicted RBP17.97■□□□□ 0.47
PRDM9-203ENST00000635252 FAM196AQ6ZSG2 479 aa17.97■□□□□ 0.47
PRDM9-203ENST00000635252 PTF1AQ7RTS3 328 aa17.97■□□□□ 0.47
PRDM9-203ENST00000635252 MRS2Q9HD23 443 aa17.97■□□□□ 0.47
PRDM9-203ENST00000635252 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.47
PRDM9-203ENST00000635252 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.47
PRDM9-203ENST00000635252 FCHSD2O94868 740 aa17.96■□□□□ 0.47
PRDM9-203ENST00000635252 MTHFSDQ2M296 383 aaKnown RBP17.96■□□□□ 0.47
PRDM9-203ENST00000635252 ZNF530Q6P9A1 599 aaPredicted RBP17.96■□□□□ 0.47
PRDM9-203ENST00000635252 ACSBG1Q96GR2 724 aa17.95■□□□□ 0.46
PRDM9-203ENST00000635252 ADAMTS8Q9UP79 889 aa17.95■□□□□ 0.46
PRDM9-203ENST00000635252 TRIM37O94972 964 aa17.94■□□□□ 0.46
PRDM9-203ENST00000635252 PHKG2P15735 406 aa17.94■□□□□ 0.46
PRDM9-203ENST00000635252 WDR43Q15061 677 aaKnown RBP eCLIP17.94■□□□□ 0.46
PRDM9-203ENST00000635252 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
PRDM9-203ENST00000635252 SBF2Q86WG5 1849 aa17.94■□□□□ 0.46
PRDM9-203ENST00000635252 KCNQ2O43526 872 aa17.93■□□□□ 0.46
PRDM9-203ENST00000635252 MIER1Q8N108 512 aa17.93■□□□□ 0.46
PRDM9-203ENST00000635252 UPF1Q92900 1129 aaKnown RBP eCLIP17.93■□□□□ 0.46
PRDM9-203ENST00000635252 CCDC146Q8IYE0 955 aa17.93■□□□□ 0.46
PRDM9-203ENST00000635252 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
PRDM9-203ENST00000635252 PNISRQ8TF01 805 aaKnown RBP17.93■□□□□ 0.46
PRDM9-203ENST00000635252 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
PRDM9-203ENST00000635252 PLEKHG2Q9H7P9 1386 aa17.92■□□□□ 0.46
PRDM9-203ENST00000635252 BCL9O00512 1426 aa17.92■□□□□ 0.46
PRDM9-203ENST00000635252 DOT1LQ8TEK3 1739 aa17.9■□□□□ 0.46
PRDM9-203ENST00000635252 TOGARAM1Q9Y4F4 1720 aa17.9■□□□□ 0.46
PRDM9-203ENST00000635252 SOCS7O14512 581 aa17.9■□□□□ 0.46
PRDM9-203ENST00000635252 NKX1-1Q15270 411 aaPredicted RBP17.9■□□□□ 0.46
PRDM9-203ENST00000635252 MPRIPQ6WCQ1 1025 aa17.9■□□□□ 0.46
PRDM9-203ENST00000635252 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.45
PRDM9-203ENST00000635252 C1orf141Q5JVX7 400 aa17.89■□□□□ 0.45
PRDM9-203ENST00000635252 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.45
PRDM9-203ENST00000635252 SYTL4Q96C24 671 aaPredicted RBP17.88■□□□□ 0.45
PRDM9-203ENST00000635252 TNS1Q9HBL0 1735 aaKnown RBP17.88■□□□□ 0.45
PRDM9-203ENST00000635252 AKAP4Q5JQC9 854 aa17.88■□□□□ 0.45
PRDM9-203ENST00000635252 NHSQ6T4R5 1651 aa17.87■□□□□ 0.45
PRDM9-203ENST00000635252 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
PRDM9-203ENST00000635252 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
PRDM9-203ENST00000635252 LGR6Q9HBX8 967 aa17.87■□□□□ 0.45
PRDM9-203ENST00000635252 MAPK8IP3Q9UPT6 1336 aa17.86■□□□□ 0.45
PRDM9-203ENST00000635252 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
PRDM9-203ENST00000635252 DCAF5Q96JK2 942 aa17.86■□□□□ 0.45
PRDM9-203ENST00000635252 ITGB4P16144 1822 aa17.86■□□□□ 0.45
PRDM9-203ENST00000635252 APBA3O96018 575 aa17.85■□□□□ 0.45
PRDM9-203ENST00000635252 DEFB132Q7Z7B7 95 aa17.85■□□□□ 0.45
PRDM9-203ENST00000635252 FAM9BQ8IZU0 186 aa17.85■□□□□ 0.45
PRDM9-203ENST00000635252 RRP7AQ9Y3A4 280 aaKnown RBP17.85■□□□□ 0.45
PRDM9-203ENST00000635252 MAP3K5Q99683 1374 aa17.85■□□□□ 0.45
PRDM9-203ENST00000635252 BTAF1O14981 1849 aa17.84■□□□□ 0.45
PRDM9-203ENST00000635252 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
PRDM9-203ENST00000635252 RUNDC1Q96C34 613 aa17.84■□□□□ 0.45
PRDM9-203ENST00000635252 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
PRDM9-203ENST00000635252 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
PRDM9-203ENST00000635252 DLG5Q8TDM6 1919 aa17.84■□□□□ 0.45
PRDM9-203ENST00000635252 GNAT3A8MTJ3 354 aa17.83■□□□□ 0.45
PRDM9-203ENST00000635252 NEFMP07197 916 aa17.83■□□□□ 0.45
PRDM9-203ENST00000635252 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.45
PRDM9-203ENST00000635252 NFE2L2Q16236 605 aa17.83■□□□□ 0.45
PRDM9-203ENST00000635252 CCDC125Q86Z20 511 aa17.83■□□□□ 0.45
PRDM9-203ENST00000635252 IL17REQ8NFR9 667 aa17.83■□□□□ 0.45
PRDM9-203ENST00000635252 SCN11AQ9UI33 1791 aa17.83■□□□□ 0.44
PRDM9-203ENST00000635252 RNMTO43148 476 aaKnown RBP17.82■□□□□ 0.44
PRDM9-203ENST00000635252 SF3B2Q13435 895 aaKnown RBP17.82■□□□□ 0.44
PRDM9-203ENST00000635252 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
PRDM9-203ENST00000635252 PIGBQ92521 554 aa17.82■□□□□ 0.44
PRDM9-203ENST00000635252 EN1Q05925 392 aaPredicted RBP17.82■□□□□ 0.44
PRDM9-203ENST00000635252 MCM10Q7L590 875 aa17.82■□□□□ 0.44
PRDM9-203ENST00000635252 ERVV-2B6SEH9 535 aa17.81■□□□□ 0.44
PRDM9-203ENST00000635252 APAF1O14727 1248 aa17.81■□□□□ 0.44
PRDM9-203ENST00000635252 TMPOP42166 694 aaKnown RBP17.81■□□□□ 0.44
PRDM9-203ENST00000635252 NEUROD2Q15784 382 aa17.81■□□□□ 0.44
PRDM9-203ENST00000635252 NFATC2IPQ8NCF5 419 aa17.81■□□□□ 0.44
PRDM9-203ENST00000635252 TMOD3Q9NYL9 352 aa17.81■□□□□ 0.44
PRDM9-203ENST00000635252 ADAMTS7Q9UKP4 1686 aa17.81■□□□□ 0.44
PRDM9-203ENST00000635252 CABP4P57796 275 aa17.8■□□□□ 0.44
PRDM9-203ENST00000635252 RIPK4P57078 832 aa17.79■□□□□ 0.44
PRDM9-203ENST00000635252 THUMPD2Q9BTF0 503 aaKnown RBP17.79■□□□□ 0.44
PRDM9-203ENST00000635252 EZH2Q15910 746 aaKnown RBP17.78■□□□□ 0.44
PRDM9-203ENST00000635252 CAMKK2Q96RR4 588 aa17.78■□□□□ 0.44
PRDM9-203ENST00000635252 BAG6P46379 1132 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms