RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FAM208AQ9UK61 1670 aaKnown RBP19.14■□□□□ 0.66
LINC00339-208ENST00000634934 ONECUT3O60422 494 aaPredicted RBP19.14■□□□□ 0.65
LINC00339-208ENST00000634934 PNNQ9H307 717 aaKnown RBP19.14■□□□□ 0.65
LINC00339-208ENST00000634934 TCP11L2Q8N4U5 519 aa19.13■□□□□ 0.65
LINC00339-208ENST00000634934 RAPGEF4Q8WZA2 1011 aa19.13■□□□□ 0.65
LINC00339-208ENST00000634934 KDRP35968 1356 aa19.13■□□□□ 0.65
LINC00339-208ENST00000634934 NEFMP07197 916 aa19.12■□□□□ 0.65
LINC00339-208ENST00000634934 NCAPD2Q15021 1401 aa19.11■□□□□ 0.65
LINC00339-208ENST00000634934 MAPK8IP3Q9UPT6 1336 aa19.11■□□□□ 0.65
LINC00339-208ENST00000634934 TATP17735 454 aaPredicted RBP19.1■□□□□ 0.65
LINC00339-208ENST00000634934 RUNDC1Q96C34 613 aa19.1■□□□□ 0.65
LINC00339-208ENST00000634934 SOCS7O14512 581 aa19.1■□□□□ 0.65
LINC00339-208ENST00000634934 IL2RBP14784 551 aa19.1■□□□□ 0.65
LINC00339-208ENST00000634934 BARGINQ6ZT62 677 aa19.1■□□□□ 0.65
LINC00339-208ENST00000634934 PLEKHF1Q96S99 279 aa19.1■□□□□ 0.65
LINC00339-208ENST00000634934 PARP4Q9UKK3 1724 aaKnown RBP19.09■□□□□ 0.65
LINC00339-208ENST00000634934 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
LINC00339-208ENST00000634934 PHACTR3Q96KR7 559 aa19.09■□□□□ 0.65
LINC00339-208ENST00000634934 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
LINC00339-208ENST00000634934 LRRC37A3O60309 1634 aa19.08■□□□□ 0.65
LINC00339-208ENST00000634934 FAM182BQ5T319 152 aa19.07■□□□□ 0.64
LINC00339-208ENST00000634934 MEGF6O75095 1541 aa19.07■□□□□ 0.64
LINC00339-208ENST00000634934 APAF1O14727 1248 aa19.05■□□□□ 0.64
LINC00339-208ENST00000634934 PLEKHO1Q53GL0 409 aaPredicted RBP19.05■□□□□ 0.64
LINC00339-208ENST00000634934 KRT27Q7Z3Y8 459 aa19.05■□□□□ 0.64
LINC00339-208ENST00000634934 DISP2A7MBM2 1401 aa19.05■□□□□ 0.64
LINC00339-208ENST00000634934 MTHFSDQ2M296 383 aaKnown RBP19.04■□□□□ 0.64
LINC00339-208ENST00000634934 AMOTQ4VCS5 1084 aa19.04■□□□□ 0.64
LINC00339-208ENST00000634934 CDCA7Q9BWT1 371 aaPredicted RBP19.04■□□□□ 0.64
LINC00339-208ENST00000634934 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
LINC00339-208ENST00000634934 OVOS2A0A0G2JMS6 1433 aa19.03■□□□□ 0.64
LINC00339-208ENST00000634934 NEUROD2Q15784 382 aa19.03■□□□□ 0.64
LINC00339-208ENST00000634934 SPG7Q9UQ90 795 aa19.03■□□□□ 0.64
LINC00339-208ENST00000634934 GAS2L2Q8NHY3 880 aa19.02■□□□□ 0.64
LINC00339-208ENST00000634934 ZCRB1Q8TBF4 217 aaKnown RBP19.02■□□□□ 0.64
LINC00339-208ENST00000634934 SALL2Q9Y467 1007 aaPredicted RBP19.02■□□□□ 0.64
LINC00339-208ENST00000634934 HNRNPUQ00839 825 aaKnown RBP eCLIP19.01■□□□□ 0.63
LINC00339-208ENST00000634934 NFE2L2Q16236 605 aa19.01■□□□□ 0.63
LINC00339-208ENST00000634934 ZNF530Q6P9A1 599 aaPredicted RBP19.01■□□□□ 0.63
LINC00339-208ENST00000634934 EXOC5O00471 708 aa19■□□□□ 0.63
LINC00339-208ENST00000634934 TMPOP42166 694 aaKnown RBP19■□□□□ 0.63
LINC00339-208ENST00000634934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19■□□□□ 0.63
LINC00339-208ENST00000634934 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
LINC00339-208ENST00000634934 RIPK4P57078 832 aa19■□□□□ 0.63
LINC00339-208ENST00000634934 PDE3BQ13370 1112 aa19■□□□□ 0.63
LINC00339-208ENST00000634934 DDB1Q16531 1140 aa19■□□□□ 0.63
LINC00339-208ENST00000634934 DDX54Q8TDD1 881 aaKnown RBP19■□□□□ 0.63
LINC00339-208ENST00000634934 C1orf141Q5JVX7 400 aa18.99■□□□□ 0.63
LINC00339-208ENST00000634934 UPF1Q92900 1129 aaKnown RBP eCLIP18.99■□□□□ 0.63
LINC00339-208ENST00000634934 PLEKHG2Q9H7P9 1386 aa18.99■□□□□ 0.63
LINC00339-208ENST00000634934 SHANK3Q9BYB0 1731 aa18.97■□□□□ 0.63
LINC00339-208ENST00000634934 PCDH11XQ9BZA7 1347 aa18.97■□□□□ 0.63
LINC00339-208ENST00000634934 PCDH11YQ9BZA8 1340 aa18.97■□□□□ 0.63
LINC00339-208ENST00000634934 TNS2Q63HR2 1409 aa18.96■□□□□ 0.63
LINC00339-208ENST00000634934 CYP27B1O15528 508 aa18.96■□□□□ 0.63
LINC00339-208ENST00000634934 AKAP4Q5JQC9 854 aa18.96■□□□□ 0.63
LINC00339-208ENST00000634934 IFNL2Q8IZJ0 200 aa18.96■□□□□ 0.63
LINC00339-208ENST00000634934 GNAT3A8MTJ3 354 aa18.95■□□□□ 0.62
LINC00339-208ENST00000634934 PHKG2P15735 406 aa18.95■□□□□ 0.62
LINC00339-208ENST00000634934 MARCH10Q8NA82 808 aaPredicted RBP18.95■□□□□ 0.62
LINC00339-208ENST00000634934 MAP3K5Q99683 1374 aa18.95■□□□□ 0.62
LINC00339-208ENST00000634934 RTF1Q92541 710 aaKnown RBP18.95■□□□□ 0.62
LINC00339-208ENST00000634934 PKD1L3Q7Z443 1732 aa18.94■□□□□ 0.62
LINC00339-208ENST00000634934 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
LINC00339-208ENST00000634934 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
LINC00339-208ENST00000634934 TRIM35Q9UPQ4 493 aa18.93■□□□□ 0.62
LINC00339-208ENST00000634934 DCTN1Q14203 1278 aa18.92■□□□□ 0.62
LINC00339-208ENST00000634934 MCM10Q7L590 875 aa18.92■□□□□ 0.62
LINC00339-208ENST00000634934 NGEFQ8N5V2 710 aa18.92■□□□□ 0.62
LINC00339-208ENST00000634934 SBF2Q86WG5 1849 aa18.91■□□□□ 0.62
LINC00339-208ENST00000634934 HSP90AB1P08238 724 aaKnown RBP18.91■□□□□ 0.62
LINC00339-208ENST00000634934 TNS1Q9HBL0 1735 aaKnown RBP18.91■□□□□ 0.62
LINC00339-208ENST00000634934 HTATSF1O43719 755 aaKnown RBP18.9■□□□□ 0.62
LINC00339-208ENST00000634934 CCDC27Q2M243 656 aa18.9■□□□□ 0.62
LINC00339-208ENST00000634934 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
LINC00339-208ENST00000634934 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
LINC00339-208ENST00000634934 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
LINC00339-208ENST00000634934 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
LINC00339-208ENST00000634934 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
LINC00339-208ENST00000634934 IL17REQ8NFR9 667 aa18.89■□□□□ 0.61
LINC00339-208ENST00000634934 DCAF5Q96JK2 942 aa18.89■□□□□ 0.61
LINC00339-208ENST00000634934 RNMTO43148 476 aaKnown RBP18.88■□□□□ 0.61
LINC00339-208ENST00000634934 TRIM37O94972 964 aa18.88■□□□□ 0.61
LINC00339-208ENST00000634934 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
LINC00339-208ENST00000634934 DLG5Q8TDM6 1919 aa18.87■□□□□ 0.61
LINC00339-208ENST00000634934 PTF1AQ7RTS3 328 aa18.87■□□□□ 0.61
LINC00339-208ENST00000634934 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
LINC00339-208ENST00000634934 KDM6AO15550 1401 aaPredicted RBP18.86■□□□□ 0.61
LINC00339-208ENST00000634934 DOT1LQ8TEK3 1739 aa18.85■□□□□ 0.61
LINC00339-208ENST00000634934 CALD1Q05682 793 aaKnown RBP18.84■□□□□ 0.61
LINC00339-208ENST00000634934 TEFQ10587 303 aa18.84■□□□□ 0.61
LINC00339-208ENST00000634934 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
LINC00339-208ENST00000634934 ZNF521Q96K83 1311 aa18.84■□□□□ 0.61
LINC00339-208ENST00000634934 CABP4P57796 275 aa18.84■□□□□ 0.61
LINC00339-208ENST00000634934 WDR63Q8IWG1 891 aa18.84■□□□□ 0.61
LINC00339-208ENST00000634934 ACSBG1Q96GR2 724 aa18.84■□□□□ 0.61
LINC00339-208ENST00000634934 LAS1LQ9Y4W2 734 aaKnown RBP18.84■□□□□ 0.61
LINC00339-208ENST00000634934 NHSQ6T4R5 1651 aa18.83■□□□□ 0.61
LINC00339-208ENST00000634934 CEMIPQ8WUJ3 1361 aa18.83■□□□□ 0.61
LINC00339-208ENST00000634934 BCL9O00512 1426 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms