RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
MECP2-220ENST00000631210 FAM9BQ8IZU0 186 aa11.11□□□□□ -0.63
MECP2-220ENST00000631210 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
MECP2-220ENST00000631210 BRWD3Q6RI45 1802 aa11.09□□□□□ -0.63
MECP2-220ENST00000631210 CYP27B1O15528 508 aa11.09□□□□□ -0.63
MECP2-220ENST00000631210 RBM6P78332 1123 aaKnown RBP11.09□□□□□ -0.63
MECP2-220ENST00000631210 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
MECP2-220ENST00000631210 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.63
MECP2-220ENST00000631210 CCDC9Q9Y3X0 531 aaKnown RBP11.09□□□□□ -0.63
MECP2-220ENST00000631210 DLG5Q8TDM6 1919 aa11.09□□□□□ -0.63
MECP2-220ENST00000631210 TNS2Q63HR2 1409 aa11.09□□□□□ -0.63
MECP2-220ENST00000631210 ADAMTS7Q9UKP4 1686 aa11.08□□□□□ -0.64
MECP2-220ENST00000631210 TATP17735 454 aaPredicted RBP11.08□□□□□ -0.64
MECP2-220ENST00000631210 RAPGEF4Q8WZA2 1011 aa11.08□□□□□ -0.64
MECP2-220ENST00000631210 RUNDC1Q96C34 613 aa11.08□□□□□ -0.64
MECP2-220ENST00000631210 RGS12O14924 1447 aa11.08□□□□□ -0.64
MECP2-220ENST00000631210 APAF1O14727 1248 aa11.07□□□□□ -0.64
MECP2-220ENST00000631210 ZCRB1Q8TBF4 217 aaKnown RBP11.07□□□□□ -0.64
MECP2-220ENST00000631210 PHF23Q9BUL5 403 aaPredicted RBP11.07□□□□□ -0.64
MECP2-220ENST00000631210 CDCA7Q9BWT1 371 aaPredicted RBP11.07□□□□□ -0.64
MECP2-220ENST00000631210 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
MECP2-220ENST00000631210 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
MECP2-220ENST00000631210 SEPT12Q8IYM1 358 aa11.06□□□□□ -0.64
MECP2-220ENST00000631210 MARCH10Q8NA82 808 aaPredicted RBP11.06□□□□□ -0.64
MECP2-220ENST00000631210 KDM6AO15550 1401 aaPredicted RBP11.06□□□□□ -0.64
MECP2-220ENST00000631210 TOGARAM1Q9Y4F4 1720 aa11.06□□□□□ -0.64
MECP2-220ENST00000631210 PHKG2P15735 406 aa11.05□□□□□ -0.64
MECP2-220ENST00000631210 RXRBP28702 533 aa11.05□□□□□ -0.64
MECP2-220ENST00000631210 NKX1-1Q15270 411 aaPredicted RBP11.05□□□□□ -0.64
MECP2-220ENST00000631210 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
MECP2-220ENST00000631210 AMOTQ4VCS5 1084 aa11.05□□□□□ -0.64
MECP2-220ENST00000631210 PLEKHO1Q53GL0 409 aaPredicted RBP11.05□□□□□ -0.64
MECP2-220ENST00000631210 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
MECP2-220ENST00000631210 RRP7AQ9Y3A4 280 aaKnown RBP11.05□□□□□ -0.64
MECP2-220ENST00000631210 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
MECP2-220ENST00000631210 DDB1Q16531 1140 aa11.04□□□□□ -0.64
MECP2-220ENST00000631210 ZNF521Q96K83 1311 aa11.04□□□□□ -0.64
MECP2-220ENST00000631210 SCN11AQ9UI33 1791 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 EP400Q96L91 3159 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 EXOC5O00471 708 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 NCBP3Q53F19 620 aaKnown RBP11.03□□□□□ -0.64
MECP2-220ENST00000631210 ZNF530Q6P9A1 599 aaPredicted RBP11.03□□□□□ -0.64
MECP2-220ENST00000631210 IL17REQ8NFR9 667 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 GAS2L2Q8NHY3 880 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 PNNQ9H307 717 aaKnown RBP11.03□□□□□ -0.64
MECP2-220ENST00000631210 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 SPG7Q9UQ90 795 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 PCDH11XQ9BZA7 1347 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 PCDH11YQ9BZA8 1340 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
MECP2-220ENST00000631210 BCL9O00512 1426 aa11.02□□□□□ -0.64
MECP2-220ENST00000631210 DCTN1Q14203 1278 aa11.02□□□□□ -0.65
MECP2-220ENST00000631210 AKAP4Q5JQC9 854 aa11.02□□□□□ -0.65
MECP2-220ENST00000631210 SIPA1L3O60292 1781 aaPredicted RBP11.02□□□□□ -0.65
MECP2-220ENST00000631210 MAPK8IP3Q9UPT6 1336 aa11.02□□□□□ -0.65
MECP2-220ENST00000631210 MRC1P22897 1456 aa11.01□□□□□ -0.65
MECP2-220ENST00000631210 SBF2Q86WG5 1849 aa11.01□□□□□ -0.65
MECP2-220ENST00000631210 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
MECP2-220ENST00000631210 RIPK4P57078 832 aa11.01□□□□□ -0.65
MECP2-220ENST00000631210 CCDC27Q2M243 656 aa11.01□□□□□ -0.65
MECP2-220ENST00000631210 FAM182BQ5T319 152 aa11.01□□□□□ -0.65
MECP2-220ENST00000631210 IFNL2Q8IZJ0 200 aa11.01□□□□□ -0.65
MECP2-220ENST00000631210 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
MECP2-220ENST00000631210 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
MECP2-220ENST00000631210 DOT1LQ8TEK3 1739 aa11.01□□□□□ -0.65
MECP2-220ENST00000631210 ITGB4P16144 1822 aa11□□□□□ -0.65
MECP2-220ENST00000631210 GNAT3A8MTJ3 354 aa11□□□□□ -0.65
MECP2-220ENST00000631210 HTATSF1O43719 755 aaKnown RBP11□□□□□ -0.65
MECP2-220ENST00000631210 NEUROD2Q15784 382 aa11□□□□□ -0.65
MECP2-220ENST00000631210 MPRIPQ6WCQ1 1025 aa11□□□□□ -0.65
MECP2-220ENST00000631210 MCM10Q7L590 875 aa11□□□□□ -0.65
MECP2-220ENST00000631210 PTF1AQ7RTS3 328 aa11□□□□□ -0.65
MECP2-220ENST00000631210 KRT27Q7Z3Y8 459 aa10.99□□□□□ -0.65
MECP2-220ENST00000631210 WWC1Q8IX03 1113 aa10.99□□□□□ -0.65
MECP2-220ENST00000631210 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
MECP2-220ENST00000631210 C1orf141Q5JVX7 400 aa10.98□□□□□ -0.65
MECP2-220ENST00000631210 DCAF5Q96JK2 942 aa10.98□□□□□ -0.65
MECP2-220ENST00000631210 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
MECP2-220ENST00000631210 A0A0G2JS52 829 aa10.97□□□□□ -0.65
MECP2-220ENST00000631210 KCNQ2O43526 872 aa10.97□□□□□ -0.65
MECP2-220ENST00000631210 ZNF853P0CG23 659 aa10.97□□□□□ -0.65
MECP2-220ENST00000631210 HNRNPUQ00839 825 aaKnown RBP eCLIP10.97□□□□□ -0.65
MECP2-220ENST00000631210 MYT1Q01538 1121 aa10.97□□□□□ -0.65
MECP2-220ENST00000631210 PDE3BQ13370 1112 aa10.97□□□□□ -0.65
MECP2-220ENST00000631210 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
MECP2-220ENST00000631210 PAPPAQ13219 1627 aa10.97□□□□□ -0.65
MECP2-220ENST00000631210 ERVV-2B6SEH9 535 aa10.96□□□□□ -0.65
MECP2-220ENST00000631210 NEFMP07197 916 aa10.96□□□□□ -0.65
MECP2-220ENST00000631210 HSP90AB1P08238 724 aaKnown RBP10.96□□□□□ -0.65
MECP2-220ENST00000631210 NGEFQ8N5V2 710 aa10.96□□□□□ -0.65
MECP2-220ENST00000631210 SLC52A2Q9HAB3 445 aa10.96□□□□□ -0.65
MECP2-220ENST00000631210 KDM3BQ7LBC6 1761 aa10.95□□□□□ -0.66
MECP2-220ENST00000631210 ZBED9Q6R2W3 1325 aa10.95□□□□□ -0.66
MECP2-220ENST00000631210 PRIM1P49642 420 aaKnown RBP10.95□□□□□ -0.66
MECP2-220ENST00000631210 NFATC2IPQ8NCF5 419 aa10.95□□□□□ -0.66
MECP2-220ENST00000631210 PIGBQ92521 554 aa10.95□□□□□ -0.66
MECP2-220ENST00000631210 ACSBG1Q96GR2 724 aa10.95□□□□□ -0.66
MECP2-220ENST00000631210 BTAF1O14981 1849 aa10.94□□□□□ -0.66
MECP2-220ENST00000631210 CHL1O00533 1208 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms