RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 PLEKHG2Q9H7P9 1386 aa22.23■■□□□ 1.15
CDC42EP4-209ENST00000630622 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
CDC42EP4-209ENST00000630622 TATP17735 454 aaPredicted RBP22.22■■□□□ 1.15
CDC42EP4-209ENST00000630622 RSPH6AQ9H0K4 717 aa22.22■■□□□ 1.15
CDC42EP4-209ENST00000630622 CCER2I3L3R5 266 aa22.21■■□□□ 1.15
CDC42EP4-209ENST00000630622 A0A0G2JS52 829 aa22.2■■□□□ 1.14
CDC42EP4-209ENST00000630622 MYT1Q01538 1121 aa22.2■■□□□ 1.14
CDC42EP4-209ENST00000630622 FCHSD2O94868 740 aa22.19■■□□□ 1.14
CDC42EP4-209ENST00000630622 DDB1Q16531 1140 aa22.19■■□□□ 1.14
CDC42EP4-209ENST00000630622 PNISRQ8TF01 805 aaKnown RBP22.19■■□□□ 1.14
CDC42EP4-209ENST00000630622 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
CDC42EP4-209ENST00000630622 EXOC5O00471 708 aa22.17■■□□□ 1.14
CDC42EP4-209ENST00000630622 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
CDC42EP4-209ENST00000630622 ZCRB1Q8TBF4 217 aaKnown RBP22.17■■□□□ 1.14
CDC42EP4-209ENST00000630622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.17■■□□□ 1.14
CDC42EP4-209ENST00000630622 ADAMTS8Q9UP79 889 aa22.17■■□□□ 1.14
CDC42EP4-209ENST00000630622 PLEKHF1Q96S99 279 aa22.15■■□□□ 1.14
CDC42EP4-209ENST00000630622 PDE3BQ13370 1112 aa22.13■■□□□ 1.13
CDC42EP4-209ENST00000630622 AMOTQ4VCS5 1084 aa22.13■■□□□ 1.13
CDC42EP4-209ENST00000630622 PLEKHO1Q53GL0 409 aaPredicted RBP22.13■■□□□ 1.13
CDC42EP4-209ENST00000630622 KRT27Q7Z3Y8 459 aa22.13■■□□□ 1.13
CDC42EP4-209ENST00000630622 MARCH10Q8NA82 808 aaPredicted RBP22.13■■□□□ 1.13
CDC42EP4-209ENST00000630622 PHACTR3Q96KR7 559 aa22.13■■□□□ 1.13
CDC42EP4-209ENST00000630622 SPG7Q9UQ90 795 aa22.13■■□□□ 1.13
CDC42EP4-209ENST00000630622 PCDH11XQ9BZA7 1347 aa22.11■■□□□ 1.13
CDC42EP4-209ENST00000630622 PCDH11YQ9BZA8 1340 aa22.11■■□□□ 1.13
CDC42EP4-209ENST00000630622 CYP27B1O15528 508 aa22.11■■□□□ 1.13
CDC42EP4-209ENST00000630622 MTHFSDQ2M296 383 aaKnown RBP22.1■■□□□ 1.13
CDC42EP4-209ENST00000630622 DDX54Q8TDD1 881 aaKnown RBP22.1■■□□□ 1.13
CDC42EP4-209ENST00000630622 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
CDC42EP4-209ENST00000630622 ZNF530Q6P9A1 599 aaPredicted RBP22.09■■□□□ 1.13
CDC42EP4-209ENST00000630622 ILDR2Q71H61 639 aa22.09■■□□□ 1.13
CDC42EP4-209ENST00000630622 PHKG2P15735 406 aa22.08■■□□□ 1.13
CDC42EP4-209ENST00000630622 FAM182BQ5T319 152 aa22.08■■□□□ 1.13
CDC42EP4-209ENST00000630622 CCDC146Q8IYE0 955 aa22.08■■□□□ 1.13
CDC42EP4-209ENST00000630622 DLG5Q8TDM6 1919 aa22.08■■□□□ 1.12
CDC42EP4-209ENST00000630622 BCL9O00512 1426 aa22.07■■□□□ 1.12
CDC42EP4-209ENST00000630622 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
CDC42EP4-209ENST00000630622 SBF2Q86WG5 1849 aa22.07■■□□□ 1.12
CDC42EP4-209ENST00000630622 VIRMAQ69YN4 1812 aaKnown RBP22.06■■□□□ 1.12
CDC42EP4-209ENST00000630622 IFNL2Q8IZJ0 200 aa22.06■■□□□ 1.12
CDC42EP4-209ENST00000630622 GAS2L2Q8NHY3 880 aa22.06■■□□□ 1.12
CDC42EP4-209ENST00000630622 TOGARAM1Q9Y4F4 1720 aa22.06■■□□□ 1.12
CDC42EP4-209ENST00000630622 ADAMTS7Q9UKP4 1686 aa22.05■■□□□ 1.12
CDC42EP4-209ENST00000630622 EP400Q96L91 3159 aa22.05■■□□□ 1.12
CDC42EP4-209ENST00000630622 NKX1-1Q15270 411 aaPredicted RBP22.05■■□□□ 1.12
CDC42EP4-209ENST00000630622 FAM9BQ8IZU0 186 aa22.05■■□□□ 1.12
CDC42EP4-209ENST00000630622 MAPK8IP3Q9UPT6 1336 aa22.05■■□□□ 1.12
CDC42EP4-209ENST00000630622 DOT1LQ8TEK3 1739 aa22.04■■□□□ 1.12
CDC42EP4-209ENST00000630622 NEFMP07197 916 aa22.04■■□□□ 1.12
CDC42EP4-209ENST00000630622 SCN11AQ9UI33 1791 aa22.04■■□□□ 1.12
CDC42EP4-209ENST00000630622 AKAP4Q5JQC9 854 aa22.03■■□□□ 1.12
CDC42EP4-209ENST00000630622 C1orf141Q5JVX7 400 aa22.03■■□□□ 1.12
CDC42EP4-209ENST00000630622 KDM6AO15550 1401 aaPredicted RBP22.03■■□□□ 1.12
CDC42EP4-209ENST00000630622 MAP3K5Q99683 1374 aa22.02■■□□□ 1.12
CDC42EP4-209ENST00000630622 NFE2L2Q16236 605 aa22.02■■□□□ 1.12
CDC42EP4-209ENST00000630622 FAM196AQ6ZSG2 479 aa22.02■■□□□ 1.12
CDC42EP4-209ENST00000630622 NHSQ6T4R5 1651 aa22.01■■□□□ 1.11
CDC42EP4-209ENST00000630622 HSP90AB1P08238 724 aaKnown RBP22■■□□□ 1.11
CDC42EP4-209ENST00000630622 TMPOP42166 694 aaKnown RBP22■■□□□ 1.11
CDC42EP4-209ENST00000630622 ITGB4P16144 1822 aa22■■□□□ 1.11
CDC42EP4-209ENST00000630622 GNAT3A8MTJ3 354 aa21.99■■□□□ 1.11
CDC42EP4-209ENST00000630622 APAF1O14727 1248 aa21.98■■□□□ 1.11
CDC42EP4-209ENST00000630622 MPRIPQ6WCQ1 1025 aa21.98■■□□□ 1.11
CDC42EP4-209ENST00000630622 DCAF5Q96JK2 942 aa21.98■■□□□ 1.11
CDC42EP4-209ENST00000630622 KAT6BQ8WYB5 2073 aa21.97■■□□□ 1.11
CDC42EP4-209ENST00000630622 RNMTO43148 476 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-209ENST00000630622 LGR6Q9HBX8 967 aa21.96■■□□□ 1.11
CDC42EP4-209ENST00000630622 RRP7AQ9Y3A4 280 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-209ENST00000630622 TNS1Q9HBL0 1735 aaKnown RBP21.96■■□□□ 1.11
CDC42EP4-209ENST00000630622 MRC1P22897 1456 aa21.96■■□□□ 1.11
CDC42EP4-209ENST00000630622 HTATSF1O43719 755 aaKnown RBP21.95■■□□□ 1.1
CDC42EP4-209ENST00000630622 RIPK4P57078 832 aa21.95■■□□□ 1.1
CDC42EP4-209ENST00000630622 IL17REQ8NFR9 667 aa21.95■■□□□ 1.1
CDC42EP4-209ENST00000630622 ACSBG1Q96GR2 724 aa21.95■■□□□ 1.1
CDC42EP4-209ENST00000630622 CEMIPQ8WUJ3 1361 aa21.95■■□□□ 1.1
CDC42EP4-209ENST00000630622 SIPA1L3O60292 1781 aaPredicted RBP21.94■■□□□ 1.1
CDC42EP4-209ENST00000630622 KCNQ2O43526 872 aa21.94■■□□□ 1.1
CDC42EP4-209ENST00000630622 PRIM1P49642 420 aaKnown RBP21.94■■□□□ 1.1
CDC42EP4-209ENST00000630622 BTAF1O14981 1849 aa21.94■■□□□ 1.1
CDC42EP4-209ENST00000630622 ERVV-2B6SEH9 535 aa21.93■■□□□ 1.1
CDC42EP4-209ENST00000630622 TRIM37O94972 964 aa21.93■■□□□ 1.1
CDC42EP4-209ENST00000630622 PTF1AQ7RTS3 328 aa21.93■■□□□ 1.1
CDC42EP4-209ENST00000630622 NEUROD2Q15784 382 aa21.92■■□□□ 1.1
CDC42EP4-209ENST00000630622 TRIM35Q9UPQ4 493 aa21.92■■□□□ 1.1
CDC42EP4-209ENST00000630622 DCTN1Q14203 1278 aa21.91■■□□□ 1.1
CDC42EP4-209ENST00000630622 MCM10Q7L590 875 aa21.91■■□□□ 1.1
CDC42EP4-209ENST00000630622 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
CDC42EP4-209ENST00000630622 BCL11BQ9C0K0 894 aaPredicted RBP21.91■■□□□ 1.1
CDC42EP4-209ENST00000630622 SENP3-EIF4A1A0A087X0R7 540 aa21.89■■□□□ 1.09
CDC42EP4-209ENST00000630622 LMOD3Q0VAK6 560 aa21.89■■□□□ 1.09
CDC42EP4-209ENST00000630622 NCBP3Q53F19 620 aaKnown RBP21.89■■□□□ 1.09
CDC42EP4-209ENST00000630622 SYTL4Q96C24 671 aaPredicted RBP21.89■■□□□ 1.09
CDC42EP4-209ENST00000630622 SLC52A2Q9HAB3 445 aa21.89■■□□□ 1.09
CDC42EP4-209ENST00000630622 CABP4P57796 275 aa21.88■■□□□ 1.09
CDC42EP4-209ENST00000630622 PIGBQ92521 554 aa21.88■■□□□ 1.09
CDC42EP4-209ENST00000630622 THUMPD2Q9BTF0 503 aaKnown RBP21.88■■□□□ 1.09
CDC42EP4-209ENST00000630622 TMOD3Q9NYL9 352 aa21.88■■□□□ 1.09
CDC42EP4-209ENST00000630622 NFATC2IPQ8NCF5 419 aa21.87■■□□□ 1.09
CDC42EP4-209ENST00000630622 PAPPAQ13219 1627 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms