RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 RHOQP17081 205 aa7.91□□□□□ -1.14
VPS8-228ENST00000628962 SH3D19Q5HYK7 790 aa7.91□□□□□ -1.14
VPS8-228ENST00000628962 DZIP3Q86Y13 1208 aaKnown RBP7.91□□□□□ -1.14
VPS8-228ENST00000628962 TRIM22Q8IYM9 498 aa7.91□□□□□ -1.14
VPS8-228ENST00000628962 PROCA1Q8NCQ7 364 aaPredicted RBP7.91□□□□□ -1.14
VPS8-228ENST00000628962 CNTNAP5Q8WYK1 1306 aa7.91□□□□□ -1.14
VPS8-228ENST00000628962 IGF1RP08069 1367 aa7.9□□□□□ -1.14
VPS8-228ENST00000628962 PHF20L1A8MW92 1017 aa7.9□□□□□ -1.14
VPS8-228ENST00000628962 AP1G2O75843 785 aa7.9□□□□□ -1.14
VPS8-228ENST00000628962 DBN1Q16643 649 aa7.9□□□□□ -1.14
VPS8-228ENST00000628962 SEPT12Q8IYM1 358 aa7.9□□□□□ -1.14
VPS8-228ENST00000628962 HMX1Q9NP08 348 aaPredicted RBP7.9□□□□□ -1.14
VPS8-228ENST00000628962 GPR25O00155 361 aa7.89□□□□□ -1.15
VPS8-228ENST00000628962 MSTNO14793 375 aa7.89□□□□□ -1.15
VPS8-228ENST00000628962 ADAM23O75077 832 aa7.89□□□□□ -1.15
VPS8-228ENST00000628962 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
VPS8-228ENST00000628962 CYLDQ9NQC7 956 aa7.89□□□□□ -1.15
VPS8-228ENST00000628962 BCRP11274 1271 aa7.88□□□□□ -1.15
VPS8-228ENST00000628962 GPC1P35052 558 aa7.88□□□□□ -1.15
VPS8-228ENST00000628962 BEND7Q8N7W2 519 aaPredicted RBP7.88□□□□□ -1.15
VPS8-228ENST00000628962 PNMA1Q8ND90 353 aa7.88□□□□□ -1.15
VPS8-228ENST00000628962 XP32Q5T750 250 aa7.87□□□□□ -1.15
VPS8-228ENST00000628962 FOXR1Q6PIV2 292 aa7.87□□□□□ -1.15
VPS8-228ENST00000628962 ACDQ96AP0 544 aa7.87□□□□□ -1.15
VPS8-228ENST00000628962 DYRK1BQ9Y463 629 aa7.87□□□□□ -1.15
VPS8-228ENST00000628962 ATP5J2-PTCD1G3V325 749 aa7.86□□□□□ -1.15
VPS8-228ENST00000628962 PROCP04070 461 aa7.86□□□□□ -1.15
VPS8-228ENST00000628962 USP17L8P0C7I0 530 aa7.86□□□□□ -1.15
VPS8-228ENST00000628962 NEDD1Q8NHV4 660 aa7.86□□□□□ -1.15
VPS8-228ENST00000628962 LRRC4BQ9NT99 713 aa7.86□□□□□ -1.15
VPS8-228ENST00000628962 RIPOR1Q6ZS17 1223 aa7.85□□□□□ -1.15
VPS8-228ENST00000628962 PODNQ7Z5L7 613 aa7.85□□□□□ -1.15
VPS8-228ENST00000628962 TRIM52Q96A61 297 aa7.85□□□□□ -1.15
VPS8-228ENST00000628962 H7C1W4 665 aa7.84□□□□□ -1.15
VPS8-228ENST00000628962 GTPBP3Q969Y2 492 aaKnown RBP7.84□□□□□ -1.15
VPS8-228ENST00000628962 A0A1W2PRU2 124 aa7.83□□□□□ -1.16
VPS8-228ENST00000628962 MEN1O00255 615 aa7.83□□□□□ -1.16
VPS8-228ENST00000628962 GIGYF1O75420 1035 aaPredicted RBP7.83□□□□□ -1.16
VPS8-228ENST00000628962 FAM117AQ9C073 453 aa7.83□□□□□ -1.16
VPS8-228ENST00000628962 POU4F2Q12837 409 aa7.82□□□□□ -1.16
VPS8-228ENST00000628962 DDRGK1Q96HY6 314 aa7.82□□□□□ -1.16
VPS8-228ENST00000628962 TRERF1Q96PN7 1200 aa7.82□□□□□ -1.16
VPS8-228ENST00000628962 TRIM34Q9BYJ4 488 aa7.82□□□□□ -1.16
VPS8-228ENST00000628962 ATP1B4Q9UN42 357 aaPredicted RBP7.82□□□□□ -1.16
VPS8-228ENST00000628962 OIP5O43482 229 aa7.81□□□□□ -1.16
VPS8-228ENST00000628962 MX2P20592 715 aa7.81□□□□□ -1.16
VPS8-228ENST00000628962 ERVK-9P63128 1117 aa7.81□□□□□ -1.16
VPS8-228ENST00000628962 GAS2L1Q99501 681 aaPredicted RBP7.81□□□□□ -1.16
VPS8-228ENST00000628962 GRIP2Q9C0E4 1043 aa7.81□□□□□ -1.16
VPS8-228ENST00000628962 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
VPS8-228ENST00000628962 SPATA31C2B4DYI2 1134 aa7.8□□□□□ -1.16
VPS8-228ENST00000628962 RFC5P40937 340 aa7.8□□□□□ -1.16
VPS8-228ENST00000628962 WDR44Q5JSH3 913 aa7.8□□□□□ -1.16
VPS8-228ENST00000628962 CC2D2BQ6DHV5 1058 aa7.8□□□□□ -1.16
VPS8-228ENST00000628962 NBPF10Q6P3W6 841 aaKnown RBP7.8□□□□□ -1.16
VPS8-228ENST00000628962 CCDC125Q86Z20 511 aa7.8□□□□□ -1.16
VPS8-228ENST00000628962 NBPF15Q8N660 670 aa7.8□□□□□ -1.16
VPS8-228ENST00000628962 GPBP1L1Q9HC44 474 aaPredicted RBP7.8□□□□□ -1.16
VPS8-228ENST00000628962 CLN3Q13286 438 aa7.79□□□□□ -1.16
VPS8-228ENST00000628962 SLC27A3Q5K4L6 730 aa7.79□□□□□ -1.16
VPS8-228ENST00000628962 NSFL1CQ9UNZ2 370 aaKnown RBP7.79□□□□□ -1.16
VPS8-228ENST00000628962 ZBBXA8MT70 800 aa7.78□□□□□ -1.16
VPS8-228ENST00000628962 SNRPNP63162 240 aaKnown RBP7.78□□□□□ -1.16
VPS8-228ENST00000628962 GALNT6Q8NCL4 622 aa7.78□□□□□ -1.16
VPS8-228ENST00000628962 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
VPS8-228ENST00000628962 PCDHB9Q9Y5E1 797 aa7.78□□□□□ -1.16
VPS8-228ENST00000628962 THBS1P07996 1170 aa7.77□□□□□ -1.17
VPS8-228ENST00000628962 FBXO45P0C2W1 286 aa7.77□□□□□ -1.17
VPS8-228ENST00000628962 MAP2K3P46734 347 aa7.77□□□□□ -1.17
VPS8-228ENST00000628962 OXCT2Q9BYC2 517 aaPredicted RBP7.77□□□□□ -1.17
VPS8-228ENST00000628962 NUCKS1Q9H1E3 243 aaKnown RBP7.77□□□□□ -1.17
VPS8-228ENST00000628962 KRBA1A5PL33 1030 aa7.76□□□□□ -1.17
VPS8-228ENST00000628962 F11P03951 625 aa7.76□□□□□ -1.17
VPS8-228ENST00000628962 SCTRP47872 440 aa7.76□□□□□ -1.17
VPS8-228ENST00000628962 CYP2U1Q7Z449 544 aa7.76□□□□□ -1.17
VPS8-228ENST00000628962 CFHR5Q9BXR6 569 aa7.76□□□□□ -1.17
VPS8-228ENST00000628962 TIMMDC1Q9NPL8 285 aa7.76□□□□□ -1.17
VPS8-228ENST00000628962 SHISA8B8ZZ34 492 aa7.75□□□□□ -1.17
VPS8-228ENST00000628962 K7ELQ4 463 aaPredicted RBP7.75□□□□□ -1.17
VPS8-228ENST00000628962 WASLO00401 505 aaPredicted RBP7.75□□□□□ -1.17
VPS8-228ENST00000628962 TRAK2O60296 914 aa7.75□□□□□ -1.17
VPS8-228ENST00000628962 RNF20Q5VTR2 975 aa7.75□□□□□ -1.17
VPS8-228ENST00000628962 TAS1R3Q7RTX0 852 aa7.75□□□□□ -1.17
VPS8-228ENST00000628962 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
VPS8-228ENST00000628962 BAG6P46379 1132 aa7.74□□□□□ -1.17
VPS8-228ENST00000628962 C1orf229Q6ZS94 237 aaPredicted RBP7.74□□□□□ -1.17
VPS8-228ENST00000628962 GJD4Q96KN9 370 aaPredicted RBP7.74□□□□□ -1.17
VPS8-228ENST00000628962 ARHGEF10LQ9HCE6 1279 aa7.74□□□□□ -1.17
VPS8-228ENST00000628962 COL8A1P27658 744 aa7.73□□□□□ -1.17
VPS8-228ENST00000628962 ALYREFQ86V81 257 aaKnown RBP7.73□□□□□ -1.17
VPS8-228ENST00000628962 KLRG1Q96E93 195 aa7.73□□□□□ -1.17
VPS8-228ENST00000628962 MKL2Q9ULH7 1088 aa7.73□□□□□ -1.17
VPS8-228ENST00000628962 MCCD1P59942 119 aaPredicted RBP7.71□□□□□ -1.18
VPS8-228ENST00000628962 UBAP2LQ14157 1087 aaKnown RBP7.71□□□□□ -1.18
VPS8-228ENST00000628962 TMEM259Q4ZIN3 620 aa7.71□□□□□ -1.18
VPS8-228ENST00000628962 GDF2Q9UK05 429 aaPredicted RBP7.71□□□□□ -1.18
VPS8-228ENST00000628962 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
VPS8-228ENST00000628962 KRTAP4-8Q9BYQ9 185 aa7.7□□□□□ -1.18
VPS8-228ENST00000628962 RAB6BQ9NRW1 208 aa7.7□□□□□ -1.18
VPS8-228ENST00000628962 PHF24Q9UPV7 400 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms