RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
CDKL5-207ENST00000624700 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
CDKL5-207ENST00000624700 SERPINA10Q9UK55 444 aa8.18□□□□□ -1.1
CDKL5-207ENST00000624700 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
CDKL5-207ENST00000624700 SEMA3FQ13275 785 aa8.16□□□□□ -1.1
CDKL5-207ENST00000624700 POLMQ9NP87 494 aaPredicted RBP8.16□□□□□ -1.1
CDKL5-207ENST00000624700 GPR37L1O60883 481 aa8.15□□□□□ -1.1
CDKL5-207ENST00000624700 ITGA6P23229 1130 aa8.15□□□□□ -1.1
CDKL5-207ENST00000624700 RAB15P59190 212 aa8.15□□□□□ -1.1
CDKL5-207ENST00000624700 DZIP3Q86Y13 1208 aaKnown RBP8.15□□□□□ -1.1
CDKL5-207ENST00000624700 VWA5B2Q8N398 1253 aa8.15□□□□□ -1.1
CDKL5-207ENST00000624700 CCDC97Q96F63 343 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-207ENST00000624700 CALR3Q96L12 384 aaKnown RBP8.15□□□□□ -1.1
CDKL5-207ENST00000624700 ZNF395Q9H8N7 513 aaPredicted RBP8.15□□□□□ -1.1
CDKL5-207ENST00000624700 TMPRSS4Q9NRS4 437 aa8.15□□□□□ -1.1
CDKL5-207ENST00000624700 ADH1AP07327 375 aa8.14□□□□□ -1.11
CDKL5-207ENST00000624700 VAC14Q08AM6 782 aa8.14□□□□□ -1.11
CDKL5-207ENST00000624700 ZNF784Q8NCA9 323 aaPredicted RBP8.14□□□□□ -1.11
CDKL5-207ENST00000624700 RNF217Q8TC41 542 aa8.14□□□□□ -1.11
CDKL5-207ENST00000624700 ERVH48-1M5A8F1 160 aa8.13□□□□□ -1.11
CDKL5-207ENST00000624700 LILRA1O75019 489 aa8.13□□□□□ -1.11
CDKL5-207ENST00000624700 GSK3AP49840 483 aa8.13□□□□□ -1.11
CDKL5-207ENST00000624700 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
CDKL5-207ENST00000624700 HDGFL1Q5TGJ6 251 aa8.13□□□□□ -1.11
CDKL5-207ENST00000624700 SV2AQ7L0J3 742 aa8.13□□□□□ -1.11
CDKL5-207ENST00000624700 ALG2Q9H553 416 aa8.13□□□□□ -1.11
CDKL5-207ENST00000624700 ADAMTS8Q9UP79 889 aa8.13□□□□□ -1.11
CDKL5-207ENST00000624700 CDC14CA4D256 554 aa8.12□□□□□ -1.11
CDKL5-207ENST00000624700 ESPNB1AK53 854 aa8.12□□□□□ -1.11
CDKL5-207ENST00000624700 FBXO45P0C2W1 286 aa8.12□□□□□ -1.11
CDKL5-207ENST00000624700 PTGIRP43119 386 aa8.12□□□□□ -1.11
CDKL5-207ENST00000624700 CCDC125Q86Z20 511 aa8.12□□□□□ -1.11
CDKL5-207ENST00000624700 ARID3CA6NKF2 412 aa8.11□□□□□ -1.11
CDKL5-207ENST00000624700 ADD1P35611 737 aaKnown RBP8.11□□□□□ -1.11
CDKL5-207ENST00000624700 ZNF385CQ66K41 422 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-207ENST00000624700 TMEM151AQ8N4L1 468 aa8.11□□□□□ -1.11
CDKL5-207ENST00000624700 GLMNQ92990 594 aa8.11□□□□□ -1.11
CDKL5-207ENST00000624700 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
CDKL5-207ENST00000624700 SENP3-EIF4A1A0A087X0R7 540 aa8.1□□□□□ -1.11
CDKL5-207ENST00000624700 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-207ENST00000624700 SLURP2P0DP57 97 aa8.1□□□□□ -1.11
CDKL5-207ENST00000624700 SEPT12Q8IYM1 358 aa8.1□□□□□ -1.11
CDKL5-207ENST00000624700 KDF1Q8NAX2 398 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-207ENST00000624700 POM121CA8CG34 1229 aa8.09□□□□□ -1.11
CDKL5-207ENST00000624700 RASSF7Q02833 373 aa8.09□□□□□ -1.11
CDKL5-207ENST00000624700 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
CDKL5-207ENST00000624700 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
CDKL5-207ENST00000624700 KCTD17Q8N5Z5 321 aa8.09□□□□□ -1.11
CDKL5-207ENST00000624700 GDF11O95390 407 aa8.08□□□□□ -1.12
CDKL5-207ENST00000624700 LYSMD3Q7Z3D4 306 aa8.08□□□□□ -1.12
CDKL5-207ENST00000624700 RNF20Q5VTR2 975 aa8.07□□□□□ -1.12
CDKL5-207ENST00000624700 NFATC2IPQ8NCF5 419 aa8.07□□□□□ -1.12
CDKL5-207ENST00000624700 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
CDKL5-207ENST00000624700 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
CDKL5-207ENST00000624700 CYLDQ9NQC7 956 aa8.07□□□□□ -1.12
CDKL5-207ENST00000624700 PCDHB9Q9Y5E1 797 aa8.07□□□□□ -1.12
CDKL5-207ENST00000624700 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
CDKL5-207ENST00000624700 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
CDKL5-207ENST00000624700 CEP126Q9P2H0 1117 aa8.06□□□□□ -1.12
CDKL5-207ENST00000624700 LZTS3O60299 673 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-207ENST00000624700 ARHGEF15O94989 841 aa8.05□□□□□ -1.12
CDKL5-207ENST00000624700 SLFNL1Q499Z3 407 aa8.05□□□□□ -1.12
CDKL5-207ENST00000624700 ADAMTS2O95450 1211 aa8.04□□□□□ -1.12
CDKL5-207ENST00000624700 PRICKLE2Q7Z3G6 844 aa8.04□□□□□ -1.12
CDKL5-207ENST00000624700 ARXQ96QS3 562 aa8.04□□□□□ -1.12
CDKL5-207ENST00000624700 CUEDC1Q9NWM3 386 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-207ENST00000624700 ATP5J2-PTCD1G3V325 749 aa8.03□□□□□ -1.12
CDKL5-207ENST00000624700 GIGYF1O75420 1035 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-207ENST00000624700 PPP1R15AO75807 674 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-207ENST00000624700 MARSP56192 900 aaKnown RBP8.03□□□□□ -1.12
CDKL5-207ENST00000624700 SRSF11Q05519 484 aaKnown RBP8.03□□□□□ -1.12
CDKL5-207ENST00000624700 MAP7D1Q3KQU3 841 aa8.03□□□□□ -1.12
CDKL5-207ENST00000624700 ADAMTS19Q8TE59 1207 aa8.03□□□□□ -1.12
CDKL5-207ENST00000624700 PPP1R12CQ9BZL4 782 aa8.03□□□□□ -1.12
CDKL5-207ENST00000624700 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
CDKL5-207ENST00000624700 RHOQP17081 205 aa8.02□□□□□ -1.13
CDKL5-207ENST00000624700 GPC1P35052 558 aa8.02□□□□□ -1.13
CDKL5-207ENST00000624700 GMCL1Q96IK5 515 aa8.02□□□□□ -1.13
CDKL5-207ENST00000624700 LOC100996750A0A140TA64 210 aa8.01□□□□□ -1.13
CDKL5-207ENST00000624700 MEN1O00255 615 aa8.01□□□□□ -1.13
CDKL5-207ENST00000624700 IRS1P35568 1242 aa8.01□□□□□ -1.13
CDKL5-207ENST00000624700 GAS6Q14393 721 aa8.01□□□□□ -1.13
CDKL5-207ENST00000624700 SUZ12Q15022 739 aaKnown RBP8.01□□□□□ -1.13
CDKL5-207ENST00000624700 TRIM22Q8IYM9 498 aa8.01□□□□□ -1.13
CDKL5-207ENST00000624700 ARID3AQ99856 593 aa8.01□□□□□ -1.13
CDKL5-207ENST00000624700 KRTAP4-6Q9BYQ5 205 aa8.01□□□□□ -1.13
CDKL5-207ENST00000624700 A0A1W2PRU2 124 aa8□□□□□ -1.13
CDKL5-207ENST00000624700 PALM3A6NDB9 673 aaPredicted RBP8□□□□□ -1.13
CDKL5-207ENST00000624700 ATP9BO43861 1147 aa8□□□□□ -1.13
CDKL5-207ENST00000624700 ERVK-9P63128 1117 aa8□□□□□ -1.13
CDKL5-207ENST00000624700 MAP3K10Q02779 954 aa8□□□□□ -1.13
CDKL5-207ENST00000624700 FOXR1Q6PIV2 292 aa8□□□□□ -1.13
CDKL5-207ENST00000624700 LYPD4Q6UWN0 246 aa8□□□□□ -1.13
CDKL5-207ENST00000624700 RNF135Q8IUD6 432 aa8□□□□□ -1.13
CDKL5-207ENST00000624700 PHTF2Q8N3S3 785 aa8□□□□□ -1.13
CDKL5-207ENST00000624700 SCARF2Q96GP6 870 aaPredicted RBP8□□□□□ -1.13
CDKL5-207ENST00000624700 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
CDKL5-207ENST00000624700 CC2D2BQ6DHV5 1058 aa7.99□□□□□ -1.13
CDKL5-207ENST00000624700 KANK3Q6NY19 840 aa7.99□□□□□ -1.13
CDKL5-207ENST00000624700 SIRT1Q96EB6 747 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms