RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ARGLU1Q9NWB6 273 aaPredicted RBP7.38□□□□□ -1.23
CDKL5-205ENST00000623535 KCNA4P22459 653 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 KIF15Q9NS87 1388 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 IFIT1P09914 478 aaKnown RBP7.38□□□□□ -1.23
CDKL5-205ENST00000623535 FSD1Q9BTV5 496 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 M0QZ92 97 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 EIF6P56537 245 aaKnown RBP7.38□□□□□ -1.23
CDKL5-205ENST00000623535 SH3BP5O60239 455 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 SNX16P57768 344 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 ACTN2P35609 894 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 IRX6P78412 446 aaPredicted RBP7.38□□□□□ -1.23
CDKL5-205ENST00000623535 CCDC96Q2M329 555 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 ALS2CR12Q96Q35 445 aa7.38□□□□□ -1.23
CDKL5-205ENST00000623535 BBXQ8WY36 941 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-205ENST00000623535 INCENPQ9NQS7 918 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 IQCEQ6IPM2 695 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 SSBP05455 408 aaKnown RBP eCLIP7.37□□□□□ -1.23
CDKL5-205ENST00000623535 NECTIN2Q92692 538 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 TEX13AQ9BXU3 409 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-205ENST00000623535 BAG4O95429 457 aaKnown RBP7.37□□□□□ -1.23
CDKL5-205ENST00000623535 CCDC12Q8WUD4 166 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-205ENST00000623535 SRCIN1Q9C0H9 1055 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 NR1I2O75469 434 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 GSTO1P78417 241 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 TMEM266Q2M3C6 531 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 CNGA1P29973 690 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 PDE6BP35913 854 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
CDKL5-205ENST00000623535 CTNNA3Q9UI47 895 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 CIZ1Q9ULV3 898 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 GLRX3O76003 335 aaKnown RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 HACE1Q8IYU2 909 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 CCDC7Q96M83 1385 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 CKAP2LQ8IYA6 745 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ZNF444Q8N0Y2 327 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ZRANB1Q9UGI0 708 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 DDX11L8A8MPP1 907 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ZNF396Q96N95 335 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 AKAP2Q9Y2D5 859 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ZKSCAN2Q63HK3 967 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 SPATA24Q86W54 205 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 CDC5LQ99459 802 aaKnown RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ZNF692Q9BU19 519 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 TTC12Q9H892 705 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 STK25O00506 426 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 CTNNA2P26232 953 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 TSPYL1Q9H0U9 437 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ZGPATQ8N5A5 531 aaKnown RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 SAMM50Q9Y512 469 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 FGFR1OPO95684 399 aaKnown RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ZNF219Q9P2Y4 722 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ODF2LQ9ULJ1 636 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 FILIP1Q7Z7B0 1213 aa7.36□□□□□ -1.23
CDKL5-205ENST00000623535 SMARCC1Q92922 1105 aaPredicted RBP7.36□□□□□ -1.23
CDKL5-205ENST00000623535 NOM1Q5C9Z4 860 aaKnown RBP7.35□□□□□ -1.23
CDKL5-205ENST00000623535 CEP135Q66GS9 1140 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 CADPS2Q86UW7 1296 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 PODXL2Q9NZ53 605 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 SMC3Q9UQE7 1217 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 OPA1O60313 960 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 CEP131Q9UPN4 1083 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 PDCP20941 246 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 GAS8O95995 478 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 GNAI3P08754 354 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 LRRFIP2Q9Y608 721 aaKnown RBP7.35□□□□□ -1.23
CDKL5-205ENST00000623535 GOLGA6L10A0A0M3HER8 536 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 EIF3JO75822 258 aaKnown RBP7.35□□□□□ -1.23
CDKL5-205ENST00000623535 PLS1Q14651 629 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 EYA3Q99504 573 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 ARID5AQ03989 594 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 CFAP57Q96MR6 1250 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 CCDC77Q9BR77 488 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 ANKRD45Q5TZF3 282 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 PPP1R42Q7Z4L9 355 aa7.35□□□□□ -1.23
CDKL5-205ENST00000623535 DDX12PQ92771 950 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 TSG101Q99816 390 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 NDC80O14777 642 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 CFAP70Q5T0N1 1121 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 MSANTD4Q8NCY6 345 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 SLC8A3P57103 927 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 DDX19BQ9UMR2 479 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 SYNCQ9H7C4 482 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 CCDC174Q6PII3 467 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 FOXD4L1Q9NU39 408 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 ARL1P40616 181 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-205ENST00000623535 UTP14CQ5TAP6 766 aaKnown RBP7.34□□□□□ -1.23
CDKL5-205ENST00000623535 TFCP2L1Q9NZI6 479 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 TMOD4Q9NZQ9 345 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 GSDMBQ8TAX9 411 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 PICK1Q9NRD5 415 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 FAM13BQ9NYF5 915 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 KRT23Q9C075 422 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDKL5-205ENST00000623535 CEP126Q9P2H0 1117 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 STK24Q9Y6E0 443 aa7.34□□□□□ -1.23
CDKL5-205ENST00000623535 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.34□□□□□ -1.24
CDKL5-205ENST00000623535 BICD1Q96G01 975 aa7.34□□□□□ -1.24
CDKL5-205ENST00000623535 ATP6V1E1P36543 226 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms