RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	ZBTB7A	O95365	584 aa		6.18	□□□□□ -1.42
LINC00649-219	ENST00000622171	BCL11B	Q9C0K0	894 aa	Predicted RBP	6.18	□□□□□ -1.42
LINC00649-219	ENST00000622171	PANK3	Q9H999	370 aa		6.18	□□□□□ -1.42
LINC00649-219	ENST00000622171	UTRN	P46939	3433 aa		6.18	□□□□□ -1.42
LINC00649-219	ENST00000622171	GOLGB1	Q14789	3259 aa	Known RBP	6.18	□□□□□ -1.42
LINC00649-219	ENST00000622171	SMG6	Q86US8	1419 aa	Known RBP	6.17	□□□□□ -1.42
LINC00649-219	ENST00000622171	SMIM5	Q71RC9	77 aa		6.17	□□□□□ -1.42
LINC00649-219	ENST00000622171	KIF7	Q2M1P5	1343 aa		6.17	□□□□□ -1.42
LINC00649-219	ENST00000622171	CLSPN	Q9HAW4	1339 aa		6.17	□□□□□ -1.42
LINC00649-219	ENST00000622171	RTL1	A6NKG5	1358 aa		6.17	□□□□□ -1.42
LINC00649-219	ENST00000622171	FLT4	P35916	1363 aa		6.17	□□□□□ -1.42
LINC00649-219	ENST00000622171	TXNRD1	Q16881	649 aa		6.16	□□□□□ -1.42
LINC00649-219	ENST00000622171	ZNF827	Q17R98	1081 aa		6.16	□□□□□ -1.42
LINC00649-219	ENST00000622171	CC2D1B	Q5T0F9	858 aa	Known RBP	6.16	□□□□□ -1.42
LINC00649-219	ENST00000622171	PROM2	Q8N271	834 aa		6.16	□□□□□ -1.42
LINC00649-219	ENST00000622171	ATF5	Q9Y2D1	282 aa	Predicted RBP	6.16	□□□□□ -1.42
LINC00649-219	ENST00000622171	CGNL1	Q0VF96	1302 aa		6.16	□□□□□ -1.42
LINC00649-219	ENST00000622171	NSD2	O96028	1365 aa		6.16	□□□□□ -1.42
LINC00649-219	ENST00000622171	PRIM1	P49642	420 aa	Known RBP	6.15	□□□□□ -1.42
LINC00649-219	ENST00000622171	CDCA8	Q53HL2	280 aa		6.15	□□□□□ -1.42
LINC00649-219	ENST00000622171	AEBP1	Q8IUX7	1158 aa		6.15	□□□□□ -1.42
LINC00649-219	ENST00000622171	KLHL34	Q8N239	644 aa		6.15	□□□□□ -1.42
LINC00649-219	ENST00000622171	LRRC4B	Q9NT99	713 aa		6.15	□□□□□ -1.42
LINC00649-219	ENST00000622171	INSR	P06213	1382 aa		6.15	□□□□□ -1.43
LINC00649-219	ENST00000622171	UBR3	Q6ZT12	1888 aa		6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	TAT	P17735	454 aa	Predicted RBP	6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	EIF4A2	Q14240	407 aa	Known RBP	6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	MSL1	Q68DK7	614 aa		6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	ZCRB1	Q8TBF4	217 aa	Known RBP	6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	RAPGEF4	Q8WZA2	1011 aa		6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	PUS7	Q96PZ0	661 aa	Known RBP	6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	EYA1	Q99502	592 aa		6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	CDCA7	Q9BWT1	371 aa	Predicted RBP	6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	POLK	Q9UBT6	870 aa		6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	WWC3	Q9ULE0	1092 aa		6.14	□□□□□ -1.43
LINC00649-219	ENST00000622171	QSER1	Q2KHR3	1735 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	SCN11A	Q9UI33	1791 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	CYP27B1	O15528	508 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	NBPF14	Q5TI25	921 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	MPRIP	Q6WCQ1	1025 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	MORC1	Q86VD1	984 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	STK32B	Q9NY57	414 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	TIMELESS	Q9UNS1	1208 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	WASHC2A	Q641Q2	1341 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	C4B	P0C0L5	1744 aa		6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	MYH14	Q7Z406	1995 aa	Known RBP	6.13	□□□□□ -1.43
LINC00649-219	ENST00000622171	MSH5	O43196	834 aa		6.12	□□□□□ -1.43
LINC00649-219	ENST00000622171	HMOX1	P09601	288 aa		6.12	□□□□□ -1.43
LINC00649-219	ENST00000622171	C4A	P0C0L4	1744 aa		6.12	□□□□□ -1.43
LINC00649-219	ENST00000622171	PARD3	Q8TEW0	1356 aa		6.12	□□□□□ -1.43
LINC00649-219	ENST00000622171	KNSTRN	Q9Y448	316 aa		6.12	□□□□□ -1.43
LINC00649-219	ENST00000622171	DLG5	Q8TDM6	1919 aa		6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	COL5A3	P25940	1745 aa	Predicted RBP	6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	PALLD	Q8WX93	1383 aa		6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	PCDH11X	Q9BZA7	1347 aa		6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	PCDH11Y	Q9BZA8	1340 aa		6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	PHF14	O94880	888 aa		6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	SLC15A2	Q16348	729 aa		6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	AMIGO3	Q86WK7	504 aa		6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	CCNL1	Q9UK58	526 aa	Predicted RBP	6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	TJP1	Q07157	1748 aa		6.11	□□□□□ -1.43
LINC00649-219	ENST00000622171	BCL9	O00512	1426 aa		6.1	□□□□□ -1.43
LINC00649-219	ENST00000622171	KDM6A	O15550	1401 aa	Predicted RBP	6.1	□□□□□ -1.43
LINC00649-219	ENST00000622171	NCAPD2	Q15021	1401 aa		6.1	□□□□□ -1.43
LINC00649-219	ENST00000622171	PLSCR1	O15162	318 aa		6.1	□□□□□ -1.43
LINC00649-219	ENST00000622171	AMER1	Q5JTC6	1135 aa	Predicted RBP	6.1	□□□□□ -1.43
LINC00649-219	ENST00000622171	ZNF530	Q6P9A1	599 aa	Predicted RBP	6.1	□□□□□ -1.43
LINC00649-219	ENST00000622171	PELP1	Q8IZL8	1130 aa	Known RBP	6.1	□□□□□ -1.43
LINC00649-219	ENST00000622171	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.1	□□□□□ -1.43
LINC00649-219	ENST00000622171	COL3A1	P02461	1466 aa	Predicted RBP	6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	CHD4	Q14839	1912 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	CACNA1S	Q13698	1873 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	PNPLA7	Q6ZV29	1317 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	SLC24A1	O60721	1099 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	SULT6B1	Q6IMI4	303 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	PIGB	Q92521	554 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	SPON1	Q9HCB6	807 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	TFCP2L1	Q9NZI6	479 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	ASAP1	Q9ULH1	1129 aa		6.09	□□□□□ -1.43
LINC00649-219	ENST00000622171	IGSF1	Q8N6C5	1336 aa		6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	U2SURP	O15042	1029 aa	Known RBP	6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	PHKG2	P15735	406 aa		6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	PTGER2	P43116	358 aa		6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	MTHFS	P49914	203 aa		6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	LINC00116	Q8NCU8	138 aa		6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	AKT1S1	Q96B36	256 aa		6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	RBM42	Q9BTD8	480 aa	Known RBP	6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	SIPA1L3	O60292	1781 aa	Predicted RBP	6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	COL24A1	Q17RW2	1714 aa		6.08	□□□□□ -1.44
LINC00649-219	ENST00000622171	ITPK1	Q13572	414 aa		6.07	□□□□□ -1.44
LINC00649-219	ENST00000622171	COL23A1	Q86Y22	540 aa	Predicted RBP	6.07	□□□□□ -1.44
LINC00649-219	ENST00000622171	NLGN2	Q8NFZ4	835 aa		6.07	□□□□□ -1.44
LINC00649-219	ENST00000622171	TMOD3	Q9NYL9	352 aa		6.07	□□□□□ -1.44
LINC00649-219	ENST00000622171	SPG7	Q9UQ90	795 aa		6.07	□□□□□ -1.44
LINC00649-219	ENST00000622171	KIF24	Q5T7B8	1368 aa		6.06	□□□□□ -1.44
LINC00649-219	ENST00000622171	SENP3-EIF4A1	A0A087X0R7	540 aa		6.06	□□□□□ -1.44
LINC00649-219	ENST00000622171	PTCD1	O75127	700 aa	Known RBP	6.06	□□□□□ -1.44
LINC00649-219	ENST00000622171	IL13	P35225	146 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms