RNA–Protein interactions for RNA: ENST00000621961.1

PCDH7-208, Transcript of protocadherin 7, humanhuman

TSL 5

Gene PCDH7, Length 2,029 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-208ENST00000621961 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
PCDH7-208ENST00000621961 TSPOAP1O95153 1857 aa10.91□□□□□ -0.66
PCDH7-208ENST00000621961 CCDC183Q5T5S1 534 aa10.91□□□□□ -0.66
PCDH7-208ENST00000621961 PPRC1Q5VV67 1664 aaKnown RBP10.91□□□□□ -0.66
PCDH7-208ENST00000621961 MYOM2P54296 1465 aa10.91□□□□□ -0.66
PCDH7-208ENST00000621961 SMTNL1A8MU46 457 aa10.91□□□□□ -0.66
PCDH7-208ENST00000621961 CUL4AQ13619 759 aa10.91□□□□□ -0.66
PCDH7-208ENST00000621961 CASC1Q6TDU7 716 aa10.91□□□□□ -0.66
PCDH7-208ENST00000621961 INTS4Q96HW7 963 aaKnown RBP10.91□□□□□ -0.66
PCDH7-208ENST00000621961 CHAMP1Q96JM3 812 aa10.91□□□□□ -0.66
PCDH7-208ENST00000621961 TRIM35Q9UPQ4 493 aa10.91□□□□□ -0.66
PCDH7-208ENST00000621961 PTPRTO14522 1441 aa10.9□□□□□ -0.66
PCDH7-208ENST00000621961 GOLGA6L6A8MZA4 724 aa10.9□□□□□ -0.66
PCDH7-208ENST00000621961 U2AF1L5P0DN76 240 aaPredicted RBP10.9□□□□□ -0.66
PCDH7-208ENST00000621961 TMPOP42166 694 aaKnown RBP10.9□□□□□ -0.66
PCDH7-208ENST00000621961 U2AF1Q01081 240 aaKnown RBP eCLIP10.9□□□□□ -0.66
PCDH7-208ENST00000621961 MPNDQ8N594 471 aa10.9□□□□□ -0.66
PCDH7-208ENST00000621961 TMEM87AQ8NBN3 555 aa10.9□□□□□ -0.66
PCDH7-208ENST00000621961 PYCARDQ9ULZ3 195 aa10.9□□□□□ -0.66
PCDH7-208ENST00000621961 REC8O95072 547 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 SIRT2Q8IXJ6 389 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 KIF18AQ8NI77 898 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 PLEKHF1Q96S99 279 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 KCNF1Q9H3M0 494 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 FAM53CQ9NYF3 392 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 TRPM2O94759 1503 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 TRAPPC8Q9Y2L5 1435 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 MX1P20591 662 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 KRT222Q8N1A0 295 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 TMX3Q96JJ7 454 aa10.89□□□□□ -0.67
PCDH7-208ENST00000621961 CD109Q6YHK3 1445 aa10.88□□□□□ -0.67
PCDH7-208ENST00000621961 MYO3AQ8NEV4 1616 aa10.88□□□□□ -0.67
PCDH7-208ENST00000621961 NEURL4Q96JN8 1562 aa10.88□□□□□ -0.67
PCDH7-208ENST00000621961 USP48Q86UV5 1035 aa10.88□□□□□ -0.67
PCDH7-208ENST00000621961 PAXBP1Q9Y5B6 917 aa10.88□□□□□ -0.67
PCDH7-208ENST00000621961 NSD2O96028 1365 aa10.88□□□□□ -0.67
PCDH7-208ENST00000621961 GADD45BO75293 160 aaPredicted RBP10.87□□□□□ -0.67
PCDH7-208ENST00000621961 PLCD3Q8N3E9 789 aa10.87□□□□□ -0.67
PCDH7-208ENST00000621961 PTCH1Q13635 1447 aa10.87□□□□□ -0.67
PCDH7-208ENST00000621961 ZCCHC11Q5TAX3 1644 aaKnown RBP10.87□□□□□ -0.67
PCDH7-208ENST00000621961 FOXD4L5Q5VV16 416 aaPredicted RBP10.87□□□□□ -0.67
PCDH7-208ENST00000621961 FOXD4L4Q8WXT5 416 aaPredicted RBP10.87□□□□□ -0.67
PCDH7-208ENST00000621961 DCTPP1Q9H773 170 aa10.87□□□□□ -0.67
PCDH7-208ENST00000621961 KIF24Q5T7B8 1368 aa10.87□□□□□ -0.67
PCDH7-208ENST00000621961 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
PCDH7-208ENST00000621961 FUCA2Q9BTY2 467 aa10.86□□□□□ -0.67
PCDH7-208ENST00000621961 ERC2O15083 957 aa10.85□□□□□ -0.67
PCDH7-208ENST00000621961 WDR33Q9C0J8 1336 aaKnown RBP10.85□□□□□ -0.67
PCDH7-208ENST00000621961 CAPN2P17655 700 aa10.85□□□□□ -0.67
PCDH7-208ENST00000621961 MRPL50Q8N5N7 158 aaKnown RBP10.85□□□□□ -0.67
PCDH7-208ENST00000621961 ZNF397Q8NF99 534 aaPredicted RBP10.85□□□□□ -0.67
PCDH7-208ENST00000621961 C1orf115Q9H7X2 142 aa10.85□□□□□ -0.67
PCDH7-208ENST00000621961 ATAD2Q6PL18 1390 aa10.85□□□□□ -0.67
PCDH7-208ENST00000621961 ABCC4O15439 1325 aa10.85□□□□□ -0.67
PCDH7-208ENST00000621961 ABCC1P33527 1531 aa10.84□□□□□ -0.67
PCDH7-208ENST00000621961 SDSP20132 328 aa10.84□□□□□ -0.67
PCDH7-208ENST00000621961 RTL1A6NKG5 1358 aa10.84□□□□□ -0.67
PCDH7-208ENST00000621961 SMARCA5O60264 1052 aaPredicted RBP10.84□□□□□ -0.67
PCDH7-208ENST00000621961 NEK4P51957 841 aa10.84□□□□□ -0.67
PCDH7-208ENST00000621961 UBE2HP62256 183 aa10.84□□□□□ -0.67
PCDH7-208ENST00000621961 CCDC112Q8NEF3 446 aa10.84□□□□□ -0.67
PCDH7-208ENST00000621961 IL17RAQ96F46 866 aa10.84□□□□□ -0.67
PCDH7-208ENST00000621961 RPAP1Q9BWH6 1393 aaPredicted RBP10.83□□□□□ -0.68
PCDH7-208ENST00000621961 AP5Z1O43299 807 aa10.83□□□□□ -0.68
PCDH7-208ENST00000621961 IRX3P78415 501 aaPredicted RBP10.83□□□□□ -0.68
PCDH7-208ENST00000621961 SLFNL1Q499Z3 407 aa10.83□□□□□ -0.68
PCDH7-208ENST00000621961 CFAP70Q5T0N1 1121 aa10.83□□□□□ -0.68
PCDH7-208ENST00000621961 ABCA6Q8N139 1617 aa10.83□□□□□ -0.68
PCDH7-208ENST00000621961 MAP3K4Q9Y6R4 1608 aa10.82□□□□□ -0.68
PCDH7-208ENST00000621961 ANAPC15P60006 121 aa10.82□□□□□ -0.68
PCDH7-208ENST00000621961 PUS7Q96PZ0 661 aaKnown RBP10.82□□□□□ -0.68
PCDH7-208ENST00000621961 SLC12A5Q9H2X9 1139 aa10.82□□□□□ -0.68
PCDH7-208ENST00000621961 INO80Q9ULG1 1556 aaPredicted RBP10.82□□□□□ -0.68
PCDH7-208ENST00000621961 TNNT1P13805 278 aa10.82□□□□□ -0.68
PCDH7-208ENST00000621961 PLCH2O75038 1416 aa10.82□□□□□ -0.68
PCDH7-208ENST00000621961 EFCC1Q9HA90 598 aa10.81□□□□□ -0.68
PCDH7-208ENST00000621961 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
PCDH7-208ENST00000621961 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.81□□□□□ -0.68
PCDH7-208ENST00000621961 VAMP4O75379 141 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 CYP2C19P33261 490 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 C16orf71Q8IYS4 520 aaPredicted RBP10.8□□□□□ -0.68
PCDH7-208ENST00000621961 SPC24Q8NBT2 197 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 API5Q9BZZ5 524 aaKnown RBP10.8□□□□□ -0.68
PCDH7-208ENST00000621961 CHRM1P11229 460 aaPredicted RBP10.8□□□□□ -0.68
PCDH7-208ENST00000621961 PTGS1P23219 599 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 MCCP23508 829 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 KMT5BQ4FZB7 885 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 PAXIP1Q6ZW49 1069 aaPredicted RBP10.8□□□□□ -0.68
PCDH7-208ENST00000621961 TEX2Q8IWB9 1127 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 KIF1BPQ96EK5 621 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 COL3A1P02461 1466 aaPredicted RBP10.8□□□□□ -0.68
PCDH7-208ENST00000621961 ARAP3Q8WWN8 1544 aa10.8□□□□□ -0.68
PCDH7-208ENST00000621961 SPAG9O60271 1321 aaKnown RBP10.8□□□□□ -0.68
PCDH7-208ENST00000621961 RGS12O14924 1447 aa10.79□□□□□ -0.68
PCDH7-208ENST00000621961 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
PCDH7-208ENST00000621961 RNF20Q5VTR2 975 aa10.79□□□□□ -0.68
PCDH7-208ENST00000621961 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.79□□□□□ -0.68
PCDH7-208ENST00000621961 ANKRD44Q8N8A2 993 aa10.79□□□□□ -0.68
PCDH7-208ENST00000621961 SRCIN1Q9C0H9 1055 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms